RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 EPHA5P54756 1037 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 AIF1P55008 147 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 BRD3Q15059 726 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 TEX44Q53QW1 395 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 CERCAMQ5T4B2 595 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 TADA2BQ86TJ2 420 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 CAND1Q86VP6 1230 aaKnown RBP11.91□□□□□ -0.5
SKA3-203ENST00000400018 SH2D3CQ8N5H7 860 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 SPATA13Q96N96 652 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 SAMD11Q96NU1 681 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 SFXN1Q9H9B4 322 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 FBRSL1Q9HCM7 1045 aaKnown RBP11.91□□□□□ -0.5
SKA3-203ENST00000400018 COMMD8Q9NX08 183 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 ZDHHC7Q9NXF8 308 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 RCOR3Q9P2K3 495 aaPredicted RBP11.91□□□□□ -0.5
SKA3-203ENST00000400018 TBK1Q9UHD2 729 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 MAD1L1Q9Y6D9 718 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 AGPSO00116 658 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 SERPINB6P35237 376 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 GMPRP36959 345 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 HCAR3P49019 387 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 NR2C2P49116 596 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 SCNN1BP51168 640 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 KDSRQ06136 332 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 ADAM15Q13444 863 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 SERINC3Q13530 473 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 ZNF77Q15935 545 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 GEN1Q17RS7 908 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 ARHGAP15Q53QZ3 475 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 FYB2Q5VWT5 728 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 SMYD5Q6GMV2 418 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 SLCO2A1Q92959 643 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 EXOC4Q96A65 974 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 HDAC11Q96DB2 347 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 ASB16Q96NS5 453 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 SERPINB12Q96P63 405 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 FAM114A2Q9NRY5 505 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 HOMER3Q9NSC5 361 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 LSM7Q9UK45 103 aaKnown RBP11.91□□□□□ -0.5
SKA3-203ENST00000400018 HPCAL4Q9UM19 191 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 PLAAQ9Y263 795 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 PCDHGC4Q9Y5F7 938 aa11.91□□□□□ -0.5
SKA3-203ENST00000400018 NEBLO76041 1014 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 MGAT1P26572 445 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 ELK3P41970 407 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 GALNT3Q14435 633 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 KCNJ11Q14654 390 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 LONRF1Q17RB8 773 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 CASC4Q6P4E1 433 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 GPR149Q86SP6 731 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 EPS8L3Q8TE67 593 aaKnown RBP11.9□□□□□ -0.5
SKA3-203ENST00000400018 ARL8AQ96BM9 186 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 FEM1AQ9BSK4 669 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 KIF9Q9HAQ2 790 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 ARHGAP26Q9UNA1 814 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 FGF10O15520 208 aaPredicted RBP11.9□□□□□ -0.5
SKA3-203ENST00000400018 UGT1A9O60656 530 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 FAM155BO75949 473 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 HNRNPA1P09651 372 aaKnown RBP eCLIP11.9□□□□□ -0.5
SKA3-203ENST00000400018 CD72P21854 359 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 STIP1P31948 543 aaKnown RBP11.9□□□□□ -0.5
SKA3-203ENST00000400018 PMS2P54278 862 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 EMC10Q5UCC4 262 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 VITQ6UXI7 678 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 HTR3DQ70Z44 454 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 UMODL1-AS1Q8N2C9 162 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 FBXO36Q8NEA4 188 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 UGT1A7Q9HAW7 530 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 UGT1A10Q9HAW8 530 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 UGT1A8Q9HAW9 530 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 DUS2Q9NX74 493 aaKnown RBP11.9□□□□□ -0.5
SKA3-203ENST00000400018 VPS51Q9UID3 782 aa11.9□□□□□ -0.5
SKA3-203ENST00000400018 KIF26AQ9ULI4 1882 aaPredicted RBP11.9□□□□□ -0.51
SKA3-203ENST00000400018 A0A1B0GVM2 712 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 TCAF2A6NFQ2 919 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 LUC7L3O95232 432 aaKnown RBP11.89□□□□□ -0.51
SKA3-203ENST00000400018 PDHA1P08559 390 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 WASP42768 502 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 CUL1Q13616 776 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 FUT11Q495W5 492 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 ACCSLQ4AC99 568 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 RABGAP1LQ5R372 815 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 AFMIDQ63HM1 303 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 PRPF39Q86UA1 669 aaKnown RBP11.89□□□□□ -0.51
SKA3-203ENST00000400018 GPR65Q8IYL9 337 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 SEMA3CQ99985 751 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 S1PR5Q9H228 398 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 PLAC1Q9HBJ0 212 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 NINJ2Q9NZG7 142 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 KCTD3Q9Y597 815 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 KNL1Q8NG31 2342 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 ERLIN1O75477 346 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 IVLP07476 585 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 ITIH2P19823 946 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 FCARP24071 287 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 CDH4P55283 916 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 POU6F1Q14863 301 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 TRMT10BQ6PF06 316 aaKnown RBP11.89□□□□□ -0.51
SKA3-203ENST00000400018 PPIL6Q8IXY8 311 aa11.89□□□□□ -0.51
SKA3-203ENST00000400018 EFHBQ8N7U6 833 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms