RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 FAM129CQ86XR2 697 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 ITFG1Q8TB96 612 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 C1orf50Q9BV19 199 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 OR12D3Q9UGF7 316 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 GPN3Q9UHW5 284 aaPredicted RBP13.93□□□□□ -0.18
VAPA-202ENST00000400000 CDC42BPAQ5VT25 1732 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 SNPHO15079 494 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 RIPK2O43353 540 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 PCCBP05166 539 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 SLC6A3Q01959 620 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 PTPAQ15257 358 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 LPCAT2Q7L5N7 544 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 LRRN4CLQ8ND94 238 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 MYLPFQ96A32 169 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 MPP4Q96JB8 637 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 CD163L1Q9NR16 1453 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 BCORL1Q5H9F3 1711 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 SLC25A12O75746 678 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 OR4Q2P0C623 313 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 CCDC166P0CW27 439 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 SERPINA4P29622 427 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 PACS1Q6VY07 963 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 NRSN1Q8IZ57 195 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 MAGEA13PA6NCF6 341 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 RGS14O43566 566 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 RARAP10276 462 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 PPP4CP60510 307 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 PSRC1Q6PGN9 363 aaPredicted RBP13.93□□□□□ -0.18
VAPA-202ENST00000400000 OTOP1Q7RTM1 612 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 HPS6Q86YV9 775 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 MYCBPAPQ8TBZ2 947 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 RERGQ96A58 199 aaPredicted RBP13.93□□□□□ -0.18
VAPA-202ENST00000400000 VIPAS39Q9H9C1 493 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 SLC35C2Q9NQQ7 365 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 CHST7Q9NS84 486 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 UNC13BO14795 1591 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 MRASO14807 208 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 ZBTB11O95625 1053 aaPredicted RBP13.93□□□□□ -0.18
VAPA-202ENST00000400000 LINC00032P0C843 101 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 CYP4B1P13584 511 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 GSTM5P46439 218 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 SEMA5AQ13591 1074 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 KYQ8NBH2 561 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 BHLHE22Q8NFJ8 381 aaPredicted RBP13.93□□□□□ -0.18
VAPA-202ENST00000400000 PNPT1Q8TCS8 783 aaKnown RBP13.93□□□□□ -0.18
VAPA-202ENST00000400000 MRPL48Q96GC5 212 aaKnown RBP13.93□□□□□ -0.18
VAPA-202ENST00000400000 ZCCHC2Q9C0B9 1178 aaKnown RBP13.93□□□□□ -0.18
VAPA-202ENST00000400000 POPDC2Q9HBU9 364 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 ADPRHL2Q9NX46 363 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 VPS51Q9UID3 782 aa13.93□□□□□ -0.18
VAPA-202ENST00000400000 RIMS1Q86UR5 1692 aaKnown RBP13.92□□□□□ -0.18
VAPA-202ENST00000400000 FKTNO75072 461 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 CALB2P22676 271 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 SERPINH1P50454 418 aaKnown RBP13.92□□□□□ -0.18
VAPA-202ENST00000400000 FBXO48Q5FWF7 155 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 XKR6Q5GH73 641 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 DAGLBQ8NCG7 672 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 C3orf20Q8ND61 904 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 BTBD7Q9P203 1132 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 UXTQ9UBK9 157 aaPredicted RBP13.92□□□□□ -0.18
VAPA-202ENST00000400000 MROH7Q68CQ1 1323 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 FAM25EA8MYX2 175 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 COPZ1P61923 177 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 SPANXN3Q5MJ09 141 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 TREML2Q5T2D2 321 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 GMCL1Q96IK5 515 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 ZNF354BQ96LW1 612 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 GAS2L1Q99501 681 aaPredicted RBP13.92□□□□□ -0.18
VAPA-202ENST00000400000 ELOVL4Q9GZR5 314 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 ATG10Q9H0Y0 220 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 IMP3Q9NV31 184 aaKnown RBP13.92□□□□□ -0.18
VAPA-202ENST00000400000 DNMT3LQ9UJW3 386 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 MDM4O15151 490 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 NTSP30990 170 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 AKT2P31751 481 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 PIK3CGP48736 1102 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 MRPS22P82650 360 aaKnown RBP13.92□□□□□ -0.18
VAPA-202ENST00000400000 NRG1Q02297 640 aaPredicted RBP13.92□□□□□ -0.18
VAPA-202ENST00000400000 ZNF544Q6NX49 715 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 WDR93Q6P2C0 686 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 GPR142Q7Z601 462 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 CPNE1Q99829 537 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 FOXP3Q9BZS1 431 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 BMP10O95393 424 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 CLPTM1O96005 669 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 LRPAP1P30533 357 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 CYP2A13Q16696 494 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 TMC5Q6UXY8 1006 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 CLHC1Q8NHS4 586 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 FRMD6Q96NE9 622 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 MLPHQ9BV36 600 aaPredicted RBP13.92□□□□□ -0.18
VAPA-202ENST00000400000 POLR1EQ9GZS1 481 aaKnown RBP13.92□□□□□ -0.18
VAPA-202ENST00000400000 NMRAL1Q9HBL8 299 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 CDH9Q9ULB4 789 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 PPP2R3BQ9Y5P8 575 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 ABCA6Q8N139 1617 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 ITPKBP27987 946 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 RAB27AP51159 221 aa13.92□□□□□ -0.18
VAPA-202ENST00000400000 ELAVL2Q12926 359 aaKnown RBP13.92□□□□□ -0.18
VAPA-202ENST00000400000 TSNQ15631 228 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms