RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 LGMNQ99538 433 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 C1QTNF1Q9BXJ1 281 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 MAK16Q9BXY0 300 aaKnown RBP12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 PRSS16Q9NQE7 514 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 SLC25A13Q9UJS0 675 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 PLA2G4CQ9UP65 541 aa12.65□□□□□ -0.38
HLA-DQB1-203ENST00000399082 EML5Q05BV3 1969 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ZSCAN5CA6NGD5 496 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 APOC4-APOC2K7ER74 178 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 SIN3BO75182 1162 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 TMCC1O94876 653 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 APOC2P02655 101 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 RGRP47804 291 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 COPAP53621 1224 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 SLC20A2Q08357 652 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 PPIDQ08752 370 aaKnown RBP12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 DMWDQ09019 674 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 SLC10A7Q0GE19 358 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 INO80DQ53TQ3 878 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 NYAP1Q6ZVC0 841 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ZNF354CQ86Y25 554 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 SLC13A5Q86YT5 568 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 PGBD5Q8N414 524 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ATP11CQ8NB49 1132 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ACTL9Q8TC94 416 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 COG1Q8WTW3 980 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 MAML1Q92585 1016 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 NSMCE3Q96MG7 304 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 TSGA13Q96PP4 275 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 HHIPQ96QV1 700 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 FAM129BQ96TA1 746 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 FAM118BQ9BPY3 351 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CEP44Q9C0F1 390 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 SLC6A17Q9H1V8 727 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 TNKS2Q9H2K2 1166 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 SP110Q9HB58 689 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 SPATA6Q9NWH7 488 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 UBA2Q9UBT2 640 aaPredicted RBP12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 HPCAL4Q9UM19 191 aa12.64□□□□□ -0.39
HLA-DQB1-203ENST00000399082 EDDM13A0A1B0GTR0 161 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ATG13O75143 517 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 GJB3O75712 270 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 GABRG2P18507 467 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 MX2P20592 715 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CXCL12P48061 93 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 NR2C2P49116 596 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CCR3P51677 355 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 METAP1P53582 386 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ST8SIA6P61647 398 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 OTUD4Q01804 1114 aaKnown RBP12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ZBTB17Q13105 803 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 PRKD1Q15139 912 aaPredicted RBP12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 SEL1L2Q5TEA6 688 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 TMCO4Q5TGY1 634 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 TSSK4Q6SA08 328 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 RASSF3Q86WH2 238 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 LRRC49Q8IUZ0 686 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 C1orf210Q8IVY1 113 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 TEX26Q8N6G2 289 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 PCDH20Q8N6Y1 951 aaKnown RBP12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 TSEN2Q8NCE0 465 aaKnown RBP12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CHST14Q8NCH0 376 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 MDGA1Q8NFP4 955 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 OR2A12Q8NGT7 310 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 FATE1Q969F0 183 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ZNF599Q96NL3 588 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 QKIQ96PU8 341 aaKnown RBP eCLIP12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 OSBPL9Q96SU4 736 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 TM6SF2Q9BZW4 377 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 MKRN2Q9H000 416 aaKnown RBP12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 C10orf88Q9H8K7 445 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 SMARCAL1Q9NZC9 954 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 SNX12Q9UMY4 172 aa12.63□□□□□ -0.39
HLA-DQB1-203ENST00000399082 TCRBV21S2A2A0A5A6 115 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 TARSL2A2RTX5 802 aaKnown RBP12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 KCNK1O00180 336 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 MATN3O15232 486 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 TJP3O95049 919 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CTSLP07711 333 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 NDUFV2P19404 249 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CCNCP24863 283 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 PXNP49023 591 aaPredicted RBP12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 DGKEP52429 567 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 GEMIN4P57678 1058 aaKnown RBP12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ETF1P62495 437 aaKnown RBP12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 IHHQ14623 411 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 PDK1Q15118 436 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 E2F5Q15329 346 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ACCSLQ4AC99 568 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ATXN7L2Q5T6C5 722 aaPredicted RBP12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 PAPD7Q5XG87 772 aaKnown RBP12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 DPY19L3Q6ZPD9 716 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ADAT2Q7Z6V5 191 aaKnown RBP12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 STK40Q8N2I9 435 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 RASGEF1CQ8N431 466 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 OR6K2Q8NGY2 324 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 OR2T3Q8NH03 318 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 CASKIN2Q8WXE0 1202 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 ATG4AQ8WYN0 398 aa12.62□□□□□ -0.39
HLA-DQB1-203ENST00000399082 P3H4Q92791 437 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms