RNA–Protein interactions for RNA: ENST00000399017.6

TTC3-204, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 10,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-204ENST00000399017 MAP3K14Q99558 947 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 ADAM7Q9H2U9 754 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 SMYD3Q9H7B4 428 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 LOC102724159A0A0B4J2E5 919 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 PVALEFA0A1B0GWK0 134 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 XPO1O14980 1071 aaKnown RBP5.08□□□□□ -1.6
TTC3-204ENST00000399017 SERPINA1P01009 418 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 CAP2P40123 477 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 SKIV2L2P42285 1042 aaKnown RBP5.08□□□□□ -1.6
TTC3-204ENST00000399017 VBP1P61758 197 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 MFSD10Q14728 455 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 PWP2Q15269 919 aaKnown RBP5.08□□□□□ -1.6
TTC3-204ENST00000399017 SNX20Q7Z614 316 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 CBWD2Q8IUF1 395 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 LIX1LQ8IVB5 337 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 KCNK16Q96T55 309 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 RAPGEFL1Q9UHV5 662 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 AP4E1Q9UPM8 1137 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 MAGED1Q9Y5V3 778 aaPredicted RBP5.08□□□□□ -1.6
TTC3-204ENST00000399017 KCNE2Q9Y6J6 123 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 DNMT3AQ9Y6K1 912 aaPredicted RBP5.08□□□□□ -1.6
TTC3-204ENST00000399017 CHD3Q12873 2000 aaKnown RBP5.08□□□□□ -1.6
TTC3-204ENST00000399017 CACNA1EQ15878 2313 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 TRIM38O00635 465 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 GPR37L1O60883 481 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 IL33O95760 270 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 ITGA2P17301 1181 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 DDX39BQ13838 428 aaKnown RBP5.08□□□□□ -1.6
TTC3-204ENST00000399017 PLPP4Q5VZY2 271 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 ZCCHC12Q6PEW1 402 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.08□□□□□ -1.6
TTC3-204ENST00000399017 UBR7Q8N806 425 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 SLC4A11Q8NBS3 891 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 TBC1D16Q8TBP0 767 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 TMEM47Q9BQJ4 181 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.08□□□□□ -1.6
TTC3-204ENST00000399017 ENY2Q9NPA8 101 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 PCDHB16Q9NRJ7 776 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 SAMSN1Q9NSI8 373 aaKnown RBP5.08□□□□□ -1.6
TTC3-204ENST00000399017 POTEMA6NI47 508 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 RNASEH2AO75792 299 aaKnown RBP5.08□□□□□ -1.6
TTC3-204ENST00000399017 KCNH1O95259 989 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 NQO1P15559 274 aaKnown RBP5.08□□□□□ -1.6
TTC3-204ENST00000399017 DPEP1P16444 411 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 BUD31P41223 144 aaPredicted RBP5.08□□□□□ -1.6
TTC3-204ENST00000399017 FCHO2Q0JRZ9 810 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 SLC27A1Q6PCB7 646 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 POTEGQ6S5H5 508 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 RNF44Q7L0R7 432 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 FANCMQ8IYD8 2048 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 LRRC71Q8N4P6 559 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 MDM1Q8TC05 714 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 ART5Q96L15 291 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 UNKQ9C0B0 810 aaKnown RBP5.08□□□□□ -1.6
TTC3-204ENST00000399017 LRRC40Q9H9A6 602 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 TRIM39Q9HCM9 518 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 ZBTB40Q9NUA8 1239 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 IL1RAPL1Q9NZN1 696 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 OGFRQ9NZT2 677 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 SPATA7Q9P0W8 599 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 ZNFX1Q9P2E3 1918 aaKnown RBP5.08□□□□□ -1.6
TTC3-204ENST00000399017 BTBD3Q9Y2F9 522 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 ISM1B1AKI9 464 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 PRNPP04156 253 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 ALOX5P09917 674 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 FCGR1AP12314 374 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 POU1F1P28069 291 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 OXTRP30559 389 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 TTPAP49638 278 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 VPS26BQ4G0F5 336 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 ULK3Q6PHR2 472 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 SLC2A7Q6PXP3 512 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 FOXJ1Q92949 421 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 MAML3Q96JK9 1138 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 B3GALT6Q96L58 329 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 TMEM68Q96MH6 324 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 SNX7Q9UNH6 387 aa5.08□□□□□ -1.6
TTC3-204ENST00000399017 ZDBF2Q9HCK1 2354 aa5.07□□□□□ -1.6
TTC3-204ENST00000399017 SMNDC1O75940 238 aaKnown RBP eCLIP5.07□□□□□ -1.61e-23■■■■■ 42.4
TTC3-204ENST00000399017 KRT75O95678 551 aa5.07□□□□□ -1.6
TTC3-204ENST00000399017 CHRNB3Q05901 458 aa5.07□□□□□ -1.6
TTC3-204ENST00000399017 EPS8Q12929 822 aa5.07□□□□□ -1.6
TTC3-204ENST00000399017 GRIK3Q13003 919 aa5.07□□□□□ -1.6
TTC3-204ENST00000399017 NFIXQ14938 502 aa5.07□□□□□ -1.6
TTC3-204ENST00000399017 USP17L6PQ6QN14 398 aa5.07□□□□□ -1.6
TTC3-204ENST00000399017 CENPLQ8N0S6 344 aaPredicted RBP5.07□□□□□ -1.6
TTC3-204ENST00000399017 MAGED4Q96JG8 741 aa5.07□□□□□ -1.6
TTC3-204ENST00000399017 FEM1CQ96JP0 617 aa5.07□□□□□ -1.6
TTC3-204ENST00000399017 C11orf70Q9BRQ4 267 aa5.07□□□□□ -1.6
TTC3-204ENST00000399017 ILKAPQ9H0C8 392 aaPredicted RBP5.07□□□□□ -1.6
TTC3-204ENST00000399017 DDX43Q9NXZ2 648 aaKnown RBP5.07□□□□□ -1.6
TTC3-204ENST00000399017 NPHP3-ACAD11A0A0J9YXS1 232 aa5.07□□□□□ -1.6
TTC3-204ENST00000399017 CASTOR2A6NHX0 329 aa5.07□□□□□ -1.6
TTC3-204ENST00000399017 MFN2O95140 757 aa5.07□□□□□ -1.6
TTC3-204ENST00000399017 IGHEP01854 428 aa5.07□□□□□ -1.6
TTC3-204ENST00000399017 ADORA1P30542 326 aa5.07□□□□□ -1.6
TTC3-204ENST00000399017 MELKQ14680 651 aa5.07□□□□□ -1.6
TTC3-204ENST00000399017 C2CD6Q53TS8 623 aa5.07□□□□□ -1.6
TTC3-204ENST00000399017 NOMO2Q5JPE7 1267 aa5.07□□□□□ -1.6
TTC3-204ENST00000399017 OLFML2AQ68BL7 652 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms