RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 GPRIN1Q7Z2K8 1008 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 TMC7Q7Z402 723 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 SETD3Q86TU7 594 aaPredicted RBP13.32□□□□□ -0.28
PRAME-201ENST00000398741 RP9Q8TA86 221 aaKnown RBP13.32□□□□□ -0.28
PRAME-201ENST00000398741 USP33Q8TEY7 942 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 EDEM1Q92611 657 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 RNF34Q969K3 372 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 PGAP3Q96FM1 320 aaPredicted RBP13.32□□□□□ -0.28
PRAME-201ENST00000398741 CELF6Q96J87 481 aaKnown RBP13.32□□□□□ -0.28
PRAME-201ENST00000398741 SENP8Q96LD8 212 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 SMOQ99835 787 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 NUF2Q9BZD4 464 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 ACSS2Q9NR19 701 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 STK39Q9UEW8 545 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 CDYLQ9Y232 598 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 SNX10Q9Y5X0 201 aa13.32□□□□□ -0.28
PRAME-201ENST00000398741 CASQ2O14958 399 aaPredicted RBP13.31□□□□□ -0.28
PRAME-201ENST00000398741 DDHD2O94830 711 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 FAM163BP0C2L3 166 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 VCLP18206 1134 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 PPARGP37231 505 aaPredicted RBP13.31□□□□□ -0.28
PRAME-201ENST00000398741 LHX1P48742 406 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 COG7P83436 770 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 SATB1Q01826 763 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 UGP2Q16851 508 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 ARL13AQ5H913 290 aaPredicted RBP13.31□□□□□ -0.28
PRAME-201ENST00000398741 BNC2Q6ZN30 1099 aaPredicted RBP13.31□□□□□ -0.28
PRAME-201ENST00000398741 CTU1Q7Z7A3 348 aaKnown RBP13.31□□□□□ -0.28
PRAME-201ENST00000398741 LCA5Q86VQ0 697 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 ZC3HC1Q86WB0 502 aaKnown RBP13.31□□□□□ -0.28
PRAME-201ENST00000398741 ZFAND2BQ8WV99 257 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 KCTD4Q8WVF5 259 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 MOCOSQ96EN8 888 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 PCED1BQ96HM7 432 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 CNDP1Q96KN2 507 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 ZFP42Q96MM3 310 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 MCMBPQ9BTE3 642 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 VTI1BQ9UEU0 232 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 BCAP29Q9UHQ4 241 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 PACSIN3Q9UKS6 424 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 DTNAQ9Y4J8 743 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 SLCO1B7G3V0H7 640 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 H3BNX3 289 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 PTGESO14684 152 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 TREHO43280 583 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 PEX1O43933 1283 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 LRIG2O94898 1065 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 CCR10P46092 362 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 NAGLUP54802 743 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 GRB14Q14449 540 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 PPM1LQ5SGD2 360 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 DSELQ8IZU8 1212 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 KIFC1Q9BW19 673 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 C1QTNF1Q9BXJ1 281 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 TSPYL2Q9H2G4 693 aaPredicted RBP13.31□□□□□ -0.28
PRAME-201ENST00000398741 PSMD13Q9UNM6 376 aa13.31□□□□□ -0.28
PRAME-201ENST00000398741 AAR2Q9Y312 384 aaKnown RBP13.31□□□□□ -0.28
PRAME-201ENST00000398741 TIMM13Q9Y5L4 95 aaPredicted RBP13.31□□□□□ -0.28
PRAME-201ENST00000398741 PLXNB2O15031 1838 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 MYBPHLA2RUH7 354 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 UNCXA6NJT0 531 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 DFFAO00273 331 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 SLC22A2O15244 555 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 TFEBP19484 476 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 ALDH1A3P47895 512 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 CRYBB1P53674 252 aaPredicted RBP13.3□□□□□ -0.28
PRAME-201ENST00000398741 RPL26P61254 145 aaKnown RBP13.3□□□□□ -0.28
PRAME-201ENST00000398741 DLG1Q12959 904 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 ITGA7Q13683 1181 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 FLOT2Q14254 428 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 LIN52Q52LA3 116 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 PCID2Q5JVF3 399 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 LRRC8EQ6NSJ5 796 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 RWDD4Q6NW29 188 aaKnown RBP13.3□□□□□ -0.28
PRAME-201ENST00000398741 OTOP3Q7RTS5 596 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 SLC41A1Q8IVJ1 513 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 PQLC1Q8N2U9 271 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 PIP4K2CQ8TBX8 421 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 PPP1R10Q96QC0 940 aaKnown RBP13.3□□□□□ -0.28
PRAME-201ENST00000398741 C6orf203Q9P0P8 240 aaPredicted RBP13.3□□□□□ -0.28
PRAME-201ENST00000398741 ZDHHC2Q9UIJ5 367 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 INPP5FQ9Y2H2 1132 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 ACOT9Q9Y305 439 aa13.3□□□□□ -0.28
PRAME-201ENST00000398741 CCL15-CCL14A0A0B4J2E2 113 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 BTBD19C9JJ37 291 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 CFLARO15519 480 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 SLC35E2BP0CK96 405 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 IGFBP6P24592 240 aaPredicted RBP13.29□□□□□ -0.28
PRAME-201ENST00000398741 CXCR3P49682 368 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 PSEN2P49810 448 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 PDK3Q15120 406 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 RBBP5Q15291 538 aaKnown RBP13.29□□□□□ -0.28
PRAME-201ENST00000398741 CCL15Q16663 113 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 RAB41Q5JT25 222 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 TMEM86AQ8N2M4 240 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 FSTL5Q8N475 847 aaPredicted RBP13.29□□□□□ -0.28
PRAME-201ENST00000398741 ZMIZ2Q8NF64 920 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 STYXQ8WUJ0 223 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 LRGUKQ96M69 825 aa13.29□□□□□ -0.28
PRAME-201ENST00000398741 CATSPER2Q96P56 530 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms