RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 DOCK4Q8N1I0 1966 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 IGLV3-10A0A075B6K4 115 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 FOXN3O00409 490 aaPredicted RBP12.31□□□□□ -0.44
TFF3-202ENST00000398431 FFAR2O15552 330 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 OPA1O60313 960 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 ZMPSTE24O75844 475 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 HNRNPA2B1P22626 353 aaKnown RBP12.31□□□□□ -0.44
TFF3-202ENST00000398431 ACTN2P35609 894 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 KRT83P78385 493 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 CCDC173Q0VFZ6 552 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 MTA1Q13330 715 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 ZNF542PQ5EBM4 170 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 SEL1L3Q68CR1 1132 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 GBP6Q6ZN66 633 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 DPY19L3Q6ZPD9 716 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 Q6ZSR6 202 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 ERN2Q76MJ5 926 aaKnown RBP12.31□□□□□ -0.44
TFF3-202ENST00000398431 GPR155Q7Z3F1 870 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 TMC6Q7Z403 805 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 SETD3Q86TU7 594 aaPredicted RBP12.31□□□□□ -0.44
TFF3-202ENST00000398431 SLC47A2Q86VL8 602 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 BAP1Q92560 729 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 VOPP1Q96AW1 172 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 PGAP3Q96FM1 320 aaPredicted RBP12.31□□□□□ -0.44
TFF3-202ENST00000398431 FAM81BQ96LP2 452 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 APOLD1Q96LR9 279 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 C1orf74Q96LT6 269 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 HDAC8Q9BY41 377 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 PLCB1Q9NQ66 1216 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 MPP6Q9NZW5 540 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 HS3ST3A1Q9Y663 406 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 WASF2Q9Y6W5 498 aa12.31□□□□□ -0.44
TFF3-202ENST00000398431 POM121BA6NF01 834 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 SCAMP1O15126 338 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 RAD51BO15315 384 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 CD160O95971 181 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 PAK4O96013 591 aaPredicted RBP12.3□□□□□ -0.44
TFF3-202ENST00000398431 PRNPP04156 253 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 RHOCP08134 193 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 PNMA6AP0CW24 399 aaPredicted RBP12.3□□□□□ -0.44
TFF3-202ENST00000398431 AKT2P31751 481 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 RNASE9P60153 205 aaKnown RBP12.3□□□□□ -0.44
TFF3-202ENST00000398431 DAB2P98082 770 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 PTK2Q05397 1052 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 EXOC3L4Q17RC7 722 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 BRMS1LQ5PSV4 323 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 SMYD5Q6GMV2 418 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 TRNP1Q6NT89 227 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 BNIPLQ7Z465 357 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 ZNF843Q8N446 348 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 FAM181AQ8N9Y4 354 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 DCAF4L2Q8NA75 395 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 OR7D4Q8NG98 312 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 IFT43Q96FT9 208 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 HIC2Q96JB3 615 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 TBCBQ99426 244 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 C2orf49Q9BVC5 232 aaPredicted RBP12.3□□□□□ -0.44
TFF3-202ENST00000398431 CALN1Q9BXU9 219 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 TNKS2Q9H2K2 1166 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.3□□□□□ -0.44
TFF3-202ENST00000398431 KLF15Q9UIH9 416 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 DNAJC12Q9UKB3 198 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 FARP1Q9Y4F1 1045 aaPredicted RBP12.3□□□□□ -0.44
TFF3-202ENST00000398431 ACTL7AQ9Y615 435 aa12.3□□□□□ -0.44
TFF3-202ENST00000398431 MGAQ8IWI9 3026 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 COL27A1Q8IZC6 1860 aaPredicted RBP12.29□□□□□ -0.44
TFF3-202ENST00000398431 TEX51A0A1B0GUA7 166 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 A0A1W2PNU3 283 aaPredicted RBP12.29□□□□□ -0.44
TFF3-202ENST00000398431 GTPBP10A4D1E9 387 aaKnown RBP12.29□□□□□ -0.44
TFF3-202ENST00000398431 K7ESM1 405 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 LEFTY1O75610 366 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 NEBLO76041 1014 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 DXOO77932 396 aaKnown RBP12.29□□□□□ -0.44
TFF3-202ENST00000398431 ENDOD1O94919 500 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 PCDH8O95206 1070 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 FGFR1OPO95684 399 aaKnown RBP12.29□□□□□ -0.44
TFF3-202ENST00000398431 MPOP05164 745 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 CDH5P33151 784 aaPredicted RBP12.29□□□□□ -0.44
TFF3-202ENST00000398431 KRT9P35527 623 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 GABRB2P47870 512 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 CLCN6P51797 869 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 CCDC15Q0P6D6 951 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 FZD2Q14332 565 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 TPRG1LQ5T0D9 272 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 C22orf39Q6P5X5 142 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 TFAP2DQ7Z6R9 452 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 CREBRFQ8IUR6 639 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 FAM71AQ8IYT1 594 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 GRIN3AQ8TCU5 1115 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 KLF6Q99612 283 aaPredicted RBP12.29□□□□□ -0.44
TFF3-202ENST00000398431 SLC17A9Q9BYT1 436 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 OSBPL2Q9H1P3 480 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 RRN3Q9NYV6 651 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 NLGN3Q9NZ94 848 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 IL36AQ9UHA7 158 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 RWDD2AQ9UIY3 292 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 FADS3Q9Y5Q0 445 aa12.29□□□□□ -0.44
TFF3-202ENST00000398431 SPTY2D1-AS1A0A0U1RR47 76 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 ILVBLA1L0T0 632 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 GOLGA6L3A6NEY3 463 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms