RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 RANBP1P43487 201 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 CD151P48509 253 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 PLK1P53350 603 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 PDK3Q15120 406 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 TMEM198Q66K66 360 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 RAP1GAP2Q684P5 730 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 SEL1L3Q68CR1 1132 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 ZNF470Q6ECI4 717 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 ZNF534Q76KX8 674 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 MYLK4Q86YV6 388 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 LRRC52Q8N7C0 313 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 FAM156AQ8NDB6 213 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 GPR152Q8TDT2 470 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 VCX3AQ9NNX9 186 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 ABI2Q9NYB9 513 aaPredicted RBP5.01□□□□□ -1.61
SMAD4-202ENST00000398417 NCKIPSDQ9NZQ3 722 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 CDH22Q9UJ99 828 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 DERAQ9Y315 318 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 SNX13Q9Y5W8 968 aa5.01□□□□□ -1.61
SMAD4-202ENST00000398417 MYOCOSA0A1B0GUC4 107 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 SLC12A8A0AV02 714 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 MYBPHLA2RUH7 354 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 GABBR2O75899 941 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 MYCP01106 439 aaPredicted RBP5□□□□□ -1.61
SMAD4-202ENST00000398417 LIMK2P53671 638 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 CARTPTQ16568 116 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 RBBP7Q16576 425 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 AGKQ53H12 422 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 IQSEC1Q6DN90 963 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 KRT80Q6KB66 452 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 ARCQ7LC44 396 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 MIB1Q86YT6 1006 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 APBB2Q92870 758 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 SMOQ99835 787 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 CENPKQ9BS16 269 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 NSMCE4AQ9NXX6 385 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 IGSF9Q9P2J2 1179 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 AURKCQ9UQB9 309 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 LRCH1Q9Y2L9 728 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 COL2A1P02458 1487 aaPredicted RBP5□□□□□ -1.61
SMAD4-202ENST00000398417 CAPN8A6NHC0 703 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 KLF11O14901 512 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 SNAI1O95863 264 aaPredicted RBP5□□□□□ -1.61
SMAD4-202ENST00000398417 EFEMP1Q12805 493 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 ZNF792Q3KQV3 632 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 CCDC153Q494R4 210 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 SLC39A12Q504Y0 691 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 SCIMPQ6UWF3 145 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 DQX1Q8TE96 717 aaKnown RBP5□□□□□ -1.61
SMAD4-202ENST00000398417 CCDC68Q9H2F9 335 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 MTMR10Q9NXD2 777 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 MOCS1Q9NZB8 636 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 MPP6Q9NZW5 540 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 TRHDEQ9UKU6 1024 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 KCNH4Q9UQ05 1017 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 TRPV2Q9Y5S1 764 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 SCN2AQ99250 2005 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 CASZ1Q86V15 1759 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 AKAP10O43572 662 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 TIMM44O43615 452 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 SIN3BO75182 1162 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 ANXA9O76027 345 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 NUP62P37198 522 aaPredicted RBP5□□□□□ -1.61
SMAD4-202ENST00000398417 MPP1Q00013 466 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 RALGDSQ12967 914 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 SLC25A52Q3SY17 297 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 CLEC20AQ6ZU45 233 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 ARMCX6Q7L4S7 300 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 LDB1Q86U70 411 aaPredicted RBP5□□□□□ -1.61
SMAD4-202ENST00000398417 ARRDC4Q8NCT1 418 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 CEP70Q8NHQ1 597 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 JADE3Q92613 823 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 GLOD4Q9HC38 313 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 EYSQ5T1H1 3165 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 TMEM233B4DJY2 109 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 SUPT3HB4E1H0 165 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 C9IYK1 514 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 CASQ2O14958 399 aaPredicted RBP5□□□□□ -1.61
SMAD4-202ENST00000398417 TSPAN3O60637 253 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 SUPT3HO75486 399 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 NPR3P17342 541 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 AXLP30530 894 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 GJA5P36382 358 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 HADHAP40939 763 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 GJA9P57773 515 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 CDC42EP1Q00587 391 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 FOLH1Q04609 750 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 DYNC1I2Q13409 638 aaKnown RBP5□□□□□ -1.61
SMAD4-202ENST00000398417 PAOXQ6QHF9 649 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 EGFL6Q8IUX8 553 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 DCP1BQ8IZD4 617 aaKnown RBP5□□□□□ -1.61
SMAD4-202ENST00000398417 RPRD1AQ96P16 312 aaPredicted RBP5□□□□□ -1.61
SMAD4-202ENST00000398417 SH3GL3Q99963 347 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 RAP2CQ9Y3L5 183 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 MYH13Q9UKX3 1938 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 ZBTB42B2RXF5 422 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 TMEM114B3SHH9 223 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 C9JVG2 144 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 UBDO15205 165 aa5□□□□□ -1.61
SMAD4-202ENST00000398417 BNIP3LO60238 219 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms