RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 UBE3AQ05086 875 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 RSPO2Q6UXX9 243 aaPredicted RBP7.5□□□□□ -1.21
RGPD1-201ENST00000398193 C14orf80Q86SX3 495 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 GPR150Q8NGU9 434 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 CFAP61Q8NHU2 1237 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 PSMG2Q969U7 264 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 CLSTN3Q9BQT9 956 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 ZFATQ9P243 1243 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 PCDHB12Q9Y5F1 795 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 LOC285095A0A1B0GVY8 99 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 HLA-DQB2P05538 268 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 HMGA1P17096 107 aaKnown RBP7.5□□□□□ -1.21
RGPD1-201ENST00000398193 GRK2P25098 689 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 SERPINB5P36952 375 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 POLD3Q15054 466 aaPredicted RBP7.5□□□□□ -1.21
RGPD1-201ENST00000398193 SLC1A5Q15758 541 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 MARC1Q5VT66 337 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 FBXL22Q6P050 247 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 KCNMB4Q86W47 210 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 CPXM2Q8N436 756 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 SP7Q8TDD2 431 aaPredicted RBP7.5□□□□□ -1.21
RGPD1-201ENST00000398193 HMCESQ96FZ2 354 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 TMEM169Q96HH4 297 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 POPDC3Q9HBV1 291 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 SAR1AQ9NR31 198 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 MRPL17Q9NRX2 175 aaKnown RBP7.5□□□□□ -1.21
RGPD1-201ENST00000398193 MAGED2Q9UNF1 606 aaPredicted RBP7.5□□□□□ -1.21
RGPD1-201ENST00000398193 C2CD2LO14523 706 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 FGF1P05230 155 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 ITGA2BP08514 1039 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 TCF3P15923 654 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 FOXN2P32314 431 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 CSNK1DP48730 415 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 NRLP54845 237 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 WDR5P61964 334 aaKnown RBP7.5□□□□□ -1.21
RGPD1-201ENST00000398193 PDE1BQ01064 536 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 ACVR1Q04771 509 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 DUSP4Q13115 394 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 SETDB1Q15047 1291 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 TSNAXIP1Q2TAA8 658 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 HP1BP3Q5SSJ5 553 aaPredicted RBP7.5□□□□□ -1.21
RGPD1-201ENST00000398193 KIAA1841Q6NSI8 718 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 CASC4Q6P4E1 433 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 RANBP10Q6VN20 620 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 C4orf33Q8N1A6 199 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 DNAAF3Q8N9W5 541 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 GDAP1Q8TB36 358 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 MGARPQ8TDB4 240 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 USP13Q92995 863 aaPredicted RBP7.5□□□□□ -1.21
RGPD1-201ENST00000398193 MRGPRX2Q96LB1 330 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 POLR1EQ9GZS1 481 aaKnown RBP7.5□□□□□ -1.21
RGPD1-201ENST00000398193 SIK2Q9H0K1 926 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 ZBP1Q9H171 429 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 TXLNGQ9NUQ3 528 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 TBC1D30Q9Y2I9 924 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 SNX10Q9Y5X0 201 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 RPS6KL1Q9Y6S9 549 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 TTC3P53804 2025 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 NADSYN1Q6IA69 706 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.5□□□□□ -1.21
RGPD1-201ENST00000398193 TAS1R1Q7RTX1 841 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 LEMD2Q8NC56 503 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 TSPAN17Q96FV3 270 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 ELAC2Q9BQ52 826 aaKnown RBP7.5□□□□□ -1.21
RGPD1-201ENST00000398193 FICDQ9BVA6 458 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 FSD1LQ9BXM9 530 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 RBM22Q9NW64 420 aaKnown RBP eCLIP7.5□□□□□ -1.21
RGPD1-201ENST00000398193 KCNK4Q9NYG8 393 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 SORCS3Q9UPU3 1222 aa7.5□□□□□ -1.21
RGPD1-201ENST00000398193 SNNO75324 88 aaPredicted RBP7.49□□□□□ -1.21
RGPD1-201ENST00000398193 SERPINB4P48594 390 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 NECAB2Q7Z6G3 386 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 CLEC14AQ86T13 490 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 CNTD1Q8N815 330 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 C2CD4AQ8NCU7 369 aaPredicted RBP7.49□□□□□ -1.21
RGPD1-201ENST00000398193 VWCEQ96DN2 955 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 TSNARE1Q96NA8 513 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 FCRL3Q96P31 734 aaPredicted RBP7.49□□□□□ -1.21
RGPD1-201ENST00000398193 MGME1Q9BQP7 344 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 ACE2Q9BYF1 805 aaPredicted RBP7.49□□□□□ -1.21
RGPD1-201ENST00000398193 RHOJQ9H4E5 214 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 BPGMP07738 259 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 CREB1P16220 341 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 SERPINH1P50454 418 aaKnown RBP7.49□□□□□ -1.21
RGPD1-201ENST00000398193 SESN2P58004 480 aaPredicted RBP7.49□□□□□ -1.21
RGPD1-201ENST00000398193 DENND5AQ6IQ26 1287 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 PRSS55Q6UWB4 352 aaPredicted RBP7.49□□□□□ -1.21
RGPD1-201ENST00000398193 CAPN12Q6ZSI9 719 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 HJURPQ8NCD3 748 aaPredicted RBP7.49□□□□□ -1.21
RGPD1-201ENST00000398193 SCLYQ96I15 445 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 AGAP3Q96P47 875 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 GPR22Q99680 433 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 TRIM55Q9BYV6 548 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 MFSD1Q9H3U5 465 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 FGFR1OP2Q9NVK5 253 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 SEPT3Q9UH03 358 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 RPL26L1Q9UNX3 145 aaKnown RBP7.49□□□□□ -1.21
RGPD1-201ENST00000398193 A0A1B0GVM2 712 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 TCAF2A6NFQ2 919 aa7.49□□□□□ -1.21
RGPD1-201ENST00000398193 KCNK1O00180 336 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms