RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 C6orf229H3BNL8 230 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 PODXLO00592 558 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 KCNN4O15554 427 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 SLC25A17O43808 307 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 ASLP04424 464 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 CAPN1P07384 714 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 ABCB4P21439 1286 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 CTNNB1P35222 781 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 PHBP35232 272 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 PSMC5P62195 406 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 RELAQ04206 551 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 IKBKEQ14164 716 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 STAT4Q14765 748 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 GRIK5Q16478 980 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 KYAT1Q16773 422 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 RGS21Q2M5E4 152 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 PLA2G4EQ3MJ16 856 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 CMPK2Q5EBM0 449 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 THEM4Q5T1C6 240 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 RASIP1Q5U651 963 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 CASC4Q6P4E1 433 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 IL27RAQ6UWB1 636 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 CDKL3Q8IVW4 592 aaPredicted RBP6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 LINC00518Q8N0U6 118 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 PSD2Q9BQI7 771 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 REEP2Q9BRK0 252 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 MKNK1Q9BUB5 465 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 TTLL2Q9BWV7 592 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 HEMGNQ9BXL5 484 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 SENP6Q9GZR1 1112 aaPredicted RBP6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 KCNMB3Q9NPA1 279 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 SLC35C2Q9NQQ7 365 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 ADPRHL2Q9NX46 363 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 CLDN3O15551 220 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 MED24O75448 989 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 ITGA4P13612 1032 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 CNTFP26441 200 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 ECHS1P30084 290 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 CHRNA3P32297 505 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 SCTRP47872 440 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 ALDH1A3P47895 512 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 AIF1P55008 147 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 MBTPS1Q14703 1052 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 MFSD10Q14728 455 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 TSC22D1Q15714 1073 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 C2orf27AQ580R0 203 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 SNAP47Q5SQN1 464 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 GPR158Q5T848 1215 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 USP17L6PQ6QN14 398 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 NSMFQ6X4W1 530 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 KCTD1Q719H9 257 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 FJX1Q86VR8 437 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 MICALL2Q8IY33 904 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 PSD4Q8NDX1 1056 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 SLC35G2Q8TBE7 412 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 AZIN2Q96A70 460 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 ZNF669Q96BR6 464 aaPredicted RBP6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 STAMBPL1Q96FJ0 436 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 RMND5BQ96G75 393 aaPredicted RBP6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 PABPC3Q9H361 631 aaKnown RBP6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 OSGEPL1Q9H4B0 414 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 ANLNQ9NQW6 1124 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 ENOPH1Q9UHY7 261 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 PMF1-BGLAPU3KQ54 211 aa6.7□□□□□ -1.34
TM9SF4-202ENST00000398022 NCANO14594 1321 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 PFASO15067 1338 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 LOC390937A0A1W2PQ73 354 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 H0YIN7 160 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 DDX3XO00571 662 aaKnown RBP eCLIP6.69□□□□□ -1.345e-8■□□□□ 9.7
TM9SF4-202ENST00000398022 DPYSL4O14531 572 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 EIF3DO15371 548 aaKnown RBP eCLIP6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 AKAP3O75969 853 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 AGTP01019 485 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 GSTA1P08263 222 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 IL1R1P14778 569 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 STAT5AP42229 794 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 STAT2P52630 851 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 HIRAP54198 1017 aaPredicted RBP6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 CASP9P55211 416 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 CAMK2DQ13557 499 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 BMT2Q1RMZ1 405 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 LACTB2Q53H82 288 aaPredicted RBP6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 KIAA1755Q5JYT7 1200 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 CATSPER3Q86XQ3 398 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 CELF2-AS1Q8N7Q2 184 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 PDZD8Q8NEN9 1154 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 SEC14L1Q92503 715 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 SLC35C1Q96A29 364 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 ZUFSPQ96AP4 578 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 PGM2Q96G03 612 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 MASTLQ96GX5 879 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 HAPLN3Q96S86 360 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 BBS2Q9BXC9 721 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 FGFBP2Q9BYJ0 223 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 CELF4Q9BZC1 486 aaKnown RBP6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 GPR61Q9BZJ8 451 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 KCNN2Q9H2S1 579 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 RSAD1Q9HA92 442 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 CTTNBP2NLQ9P2B4 639 aa6.69□□□□□ -1.34
TM9SF4-202ENST00000398022 CNOT7Q9UIV1 285 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms