RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 MAT2AP31153 395 aaKnown RBP8.99□□□□□ -0.97
CAPN3-208ENST00000397204 TLE3Q04726 772 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 KCNMA1Q12791 1236 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 ZNF177Q13360 481 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-208ENST00000397204 AUHQ13825 339 aaKnown RBP8.99□□□□□ -0.97
CAPN3-208ENST00000397204 TBC1D25Q3MII6 688 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 EFHC1Q5JVL4 640 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 AGBL4Q5VU57 503 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 CXorf57Q6NSI4 855 aaKnown RBP8.99□□□□□ -0.97
CAPN3-208ENST00000397204 FBXL22Q6P050 247 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 DENND1BQ6P3S1 775 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 ZNF605Q86T29 641 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 TMIEQ8NEW7 156 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 OR4C6Q8NH72 309 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 RNF34Q969K3 372 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 IFT43Q96FT9 208 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 WBP1Q96G27 269 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 KREMEN1Q96MU8 473 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 TIGD1Q96MW7 591 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 RPRD1AQ96P16 312 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-208ENST00000397204 ASNSD1Q9NWL6 643 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 TBC1D30Q9Y2I9 924 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 OR51B4Q9Y5P0 310 aa8.99□□□□□ -0.97
CAPN3-208ENST00000397204 MUC22E2RYF6 1773 aaPredicted RBP8.99□□□□□ -0.97
CAPN3-208ENST00000397204 NEMP2A6NFY4 417 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 E5RJQ4 531 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 OPA1O60313 960 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 C1QL1O75973 258 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 LETM1O95202 739 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-208ENST00000397204 GP1BAP07359 652 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 THEGLP0DJG4 465 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 KRT5P13647 590 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 DUSP3P51452 185 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-208ENST00000397204 METAP1P53582 386 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 SNX16P57768 344 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 TAS2R38P59533 333 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 KRT83P78385 493 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 DAB2P98082 770 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 TAF5Q15542 800 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 C5orf22Q49AR2 442 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 Q6ZVU0 165 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 ENOSF1Q7L5Y1 443 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 ERICH1Q86X53 443 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 DCP2Q8IU60 420 aaKnown RBP8.98□□□□□ -0.97
CAPN3-208ENST00000397204 ARHGEF19Q8IW93 802 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 TRIM59Q8IWR1 403 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 SPACA3Q8IXA5 215 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 ELOA2Q8IYF1 753 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-208ENST00000397204 SH2D3CQ8N5H7 860 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 TMEM145Q8NBT3 493 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 ZNF248Q8NDW4 579 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 FAM81BQ96LP2 452 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 CCDC114Q96M63 670 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 ZNF578Q96N58 590 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-208ENST00000397204 SLC2A13Q96QE2 648 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 FAM204AQ9H8W3 233 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 USP29Q9HBJ7 922 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 GDPD2Q9HCC8 539 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 PRM3Q9NNZ6 103 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 UBE2TQ9NPD8 197 aaPredicted RBP8.98□□□□□ -0.97
CAPN3-208ENST00000397204 TMEM51Q9NW97 253 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 DDIT4Q9NX09 232 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 VPS28Q9UK41 221 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 SHROOM3Q8TF72 1996 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 NAV2Q8IVL1 2488 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 TMEM131Q92545 1883 aa8.98□□□□□ -0.97
CAPN3-208ENST00000397204 COL6A6A6NMZ7 2263 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 A0A1W2PQU0 124 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 BICDL2A1A5D9 508 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 SLC31A1O15431 190 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 THAP12O43422 761 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 SDC3O75056 442 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 AFPP02771 609 aaKnown RBP8.97□□□□□ -0.97
CAPN3-208ENST00000397204 ALPPL2P10696 532 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 CKMT1AP12532 417 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 AKT2P31751 481 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 CHRNA3P32297 505 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 LSSP48449 732 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 UCNP55089 124 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 CDH4P55283 916 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 MARSP56192 900 aaKnown RBP8.97□□□□□ -0.97
CAPN3-208ENST00000397204 ERVPABLB-1P60509 514 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 PITX1P78337 314 aaPredicted RBP8.97□□□□□ -0.97
CAPN3-208ENST00000397204 CCDC173Q0VFZ6 552 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 ZNF284Q2VY69 593 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 ACBD5Q5T8D3 534 aaPredicted RBP8.97□□□□□ -0.97
CAPN3-208ENST00000397204 BROXQ5VW32 411 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 CDCP2Q5VXM1 449 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 TTI2Q6NXR4 508 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 KDM7AQ6ZMT4 941 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 ABI3BPQ7Z7G0 1075 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 HORMAD1Q86X24 394 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 CIR1Q86X95 450 aaPredicted RBP8.97□□□□□ -0.97
CAPN3-208ENST00000397204 DEFB106AQ8N104 65 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 ZNF843Q8N446 348 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 WDTC1Q8N5D0 677 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 FAM181AQ8N9Y4 354 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 OR2A12Q8NGT7 310 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 GRAMD1AQ96CP6 724 aa8.97□□□□□ -0.97
CAPN3-208ENST00000397204 HIC2Q96JB3 615 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms