RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 SF3B4Q15427 424 aaKnown RBP eCLIP10.04□□□□□ -0.8
APTX-207ENST00000397172 NHSL2Q5HYW2 709 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 BROXQ5VW32 411 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 ANKRD22Q5VYY1 191 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 DCUN1D2Q6PH85 259 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 TMC5Q6UXY8 1006 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 TMEM26Q6ZUK4 368 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 KCTD8Q6ZWB6 473 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 OTOP1Q7RTM1 612 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 CTU1Q7Z7A3 348 aaKnown RBP10.04□□□□□ -0.8
APTX-207ENST00000397172 SNX32Q86XE0 403 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 LACC1Q8IV20 430 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 AFG1LQ8WV93 481 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 CLEC4DQ8WXI8 215 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 CPA5Q8WXQ8 436 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 SLC39A7Q92504 469 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 VMP1Q96GC9 406 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 ZNF512Q96ME7 567 aaPredicted RBP10.04□□□□□ -0.8
APTX-207ENST00000397172 LENG8Q96PV6 779 aaPredicted RBP10.04□□□□□ -0.8
APTX-207ENST00000397172 MMP19Q99542 508 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 C17orf80Q9BSJ5 609 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 KIFC3Q9BVG8 833 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 EHMT1Q9H9B1 1298 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 NXF1Q9UBU9 619 aaKnown RBP10.04□□□□□ -0.8
APTX-207ENST00000397172 RABL2BQ9UNT1 228 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 RBMX2Q9Y388 322 aaKnown RBP10.04□□□□□ -0.8
APTX-207ENST00000397172 PCDHB12Q9Y5F1 795 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 MGAMO43451 1857 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 FAM170AA1A519 330 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 HEATR9A2RTY3 570 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 SAGE2PA6NJ88 616 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 SFI1A8K8P3 1242 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 FAM25AB3EWG3 89 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 FAM25CB3EWG5 89 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 FAM25GB3EWG6 89 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 ACOT8O14734 319 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 MSI1O43347 362 aaKnown RBP10.04□□□□□ -0.8
APTX-207ENST00000397172 DYRK3O43781 588 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 AVILO75366 819 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 CRYZL1O95825 349 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 HOXC6P09630 235 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 IL10P22301 178 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 GLDCP23378 1020 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 IL12AP29459 219 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 POLR2BP30876 1174 aaKnown RBP10.04□□□□□ -0.8
APTX-207ENST00000397172 HPCAL1P37235 193 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 CDKN2BP42772 138 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 LEPRP48357 1165 aaKnown RBP10.04□□□□□ -0.8
APTX-207ENST00000397172 CAP1Q01518 475 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 GNA12Q03113 381 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 FCHO2Q0JRZ9 810 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 MERTKQ12866 999 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 TRIM32Q13049 653 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 MAP2K5Q13163 448 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 PMS2P3Q13401 168 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 SELPLGQ14242 412 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 INPP5AQ14642 412 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 CCNYL2Q5T2Q4 361 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 MAMDC4Q6UXC1 1216 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 PARP8Q8N3A8 854 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 ZCCHC7Q8N3Z6 543 aaKnown RBP10.04□□□□□ -0.8
APTX-207ENST00000397172 SFRP1Q8N474 314 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 NIPA2Q8N8Q9 360 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 OR13F1Q8NGS4 319 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 KAT5Q92993 513 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 FAF2Q96CS3 445 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 SH3YL1Q96HL8 342 aaPredicted RBP10.04□□□□□ -0.8
APTX-207ENST00000397172 C11orf70Q9BRQ4 267 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 ADI1Q9BV57 179 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 STRA6Q9BX79 667 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 WDR11Q9BZH6 1224 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 SHCBP1LQ9BZQ2 653 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 STMN3Q9NZ72 180 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 ZNF229Q9UJW7 825 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 PCDHGC3Q9UN70 934 aa10.04□□□□□ -0.8
APTX-207ENST00000397172 ZNF236Q9UL36 1845 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 PI4K2BG5E9Z4 385 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 APOC4-APOC2K7ER74 178 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 CYB561D2O14569 222 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 TEX28O15482 410 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 CLOCKO15516 846 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 PLIN3O60664 434 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 TMEM63AO94886 807 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 ALX3O95076 343 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 APOC2P02655 101 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 ERBB2P04626 1255 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 APOA4P06727 396 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 TGM1P22735 817 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 ADORA2AP29274 412 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 GRK3P35626 688 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 SREBF1P36956 1147 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 CDH15P55291 814 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 ROR1Q01973 937 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 DGUOKQ16854 277 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 N4BP2L1Q5TBK1 243 aaPredicted RBP10.03□□□□□ -0.8
APTX-207ENST00000397172 BTBD8Q5XKL5 378 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 DNAJC24Q6P3W2 148 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 ZNF773Q6PK81 442 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 ZCCHC23Q6ZST2 131 aa10.03□□□□□ -0.8
APTX-207ENST00000397172 ARMC8Q8IUR7 673 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms