RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 NEMP2A6NFY4 417 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 C9IYK1 514 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 FBP2O00757 339 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 NRP1O14786 923 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 MAGEB3O15480 346 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 CDH2P19022 906 aaPredicted RBP14.16□□□□□ -0.14
NUP98-204ENST00000397004 CYP2B6P20813 491 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 FGFR3P22607 806 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 ARNTP27540 789 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 PPARGP37231 505 aaPredicted RBP14.16□□□□□ -0.14
NUP98-204ENST00000397004 ARHGAP1Q07960 439 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 BST2Q10589 180 aaKnown RBP14.16□□□□□ -0.14
NUP98-204ENST00000397004 PAFAH1B3Q15102 231 aaKnown RBP14.16□□□□□ -0.14
NUP98-204ENST00000397004 KIAA0319Q5VV43 1072 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 DUS1LQ6P1R4 473 aaKnown RBP14.16□□□□□ -0.14
NUP98-204ENST00000397004 GK5Q6ZS86 529 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 FAM43BQ6ZT52 329 aaPredicted RBP14.16□□□□□ -0.14
NUP98-204ENST00000397004 STRADAQ7RTN6 431 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 PIGZQ86VD9 579 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 ZC3HC1Q86WB0 502 aaKnown RBP14.16□□□□□ -0.14
NUP98-204ENST00000397004 AHI1Q8N157 1196 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 RP9Q8TA86 221 aaKnown RBP14.16□□□□□ -0.14
NUP98-204ENST00000397004 GAB3Q8WWW8 586 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 KCNU1A8MYU2 1149 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 TMX2-CTNND1H3BSU7 103 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 AHSGP02765 367 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 SETSIPP0DME0 302 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 SPRP35270 261 aaPredicted RBP14.16□□□□□ -0.14
NUP98-204ENST00000397004 HPCAP84074 193 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 TNFAIP2Q03169 654 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 LRRC23Q53EV4 343 aaPredicted RBP14.16□□□□□ -0.14
NUP98-204ENST00000397004 HMBOX1Q6NT76 420 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 ZYG11AQ6WRX3 759 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 B3GNT6Q6ZMB0 384 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 KCNMB4Q86W47 210 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 DENND6AQ8IWF6 608 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 CPNE9Q8IYJ1 553 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 PGAM4Q8N0Y7 254 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 PCDH20Q8N6Y1 951 aaKnown RBP14.16□□□□□ -0.14
NUP98-204ENST00000397004 PIP4K2CQ8TBX8 421 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 TXNDC16Q9P2K2 825 aa14.16□□□□□ -0.14
NUP98-204ENST00000397004 PPP1R1BQ9UD71 204 aaPredicted RBP14.16□□□□□ -0.14
NUP98-204ENST00000397004 AURKAO14965 403 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 KCNA5P22460 613 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 SOX4Q06945 474 aaPredicted RBP14.15□□□□□ -0.14
NUP98-204ENST00000397004 NME3Q13232 169 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 PPP1R3AQ16821 1122 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 SEL1L3Q68CR1 1132 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 CYHR1Q6ZMK1 362 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 ZDHHC17Q8IUH5 632 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 PSTKQ8IV42 348 aaKnown RBP14.15□□□□□ -0.14
NUP98-204ENST00000397004 NPY6RQ99463 290 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 APBA2Q99767 749 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 TASP1Q9H6P5 420 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 E7ENX8 843 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 TOMM70O94826 608 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 ERCC2P18074 760 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 AKAP5P24588 427 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 ARL4AP40617 200 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 GJA9P57773 515 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 MPP3Q13368 585 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 NOL9Q5SY16 702 aaKnown RBP14.15□□□□□ -0.14
NUP98-204ENST00000397004 OLFML2BQ68BL8 750 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 CNSTQ6PJW8 725 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 TMA16Q96EY4 203 aaKnown RBP14.15□□□□□ -0.14
NUP98-204ENST00000397004 COQ10BQ9H8M1 238 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 LRRC40Q9H9A6 602 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 C20orf96Q9NUD7 363 aaPredicted RBP14.15□□□□□ -0.14
NUP98-204ENST00000397004 RBPJLQ9UBG7 517 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 CACNG4Q9UBN1 327 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 ADAM28Q9UKQ2 775 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 LGALS2P05162 132 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 RALGDSQ12967 914 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 SEMA3BQ13214 749 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 C9orf57Q5W0N0 161 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 OSTM1Q86WC4 334 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 SH3RF2Q8TEC5 729 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 LRTOMTQ8WZ04 291 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 LRGUKQ96M69 825 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 NXF3Q9H4D5 531 aaKnown RBP14.15□□□□□ -0.14
NUP98-204ENST00000397004 FAM96AQ9H5X1 160 aa14.15□□□□□ -0.14
NUP98-204ENST00000397004 WDR6Q9NNW5 1121 aaKnown RBP14.15□□□□□ -0.14
NUP98-204ENST00000397004 A0A0J9YVX5 310 aa14.14□□□□□ -0.15
NUP98-204ENST00000397004 VAPBO95292 243 aa14.14□□□□□ -0.15
NUP98-204ENST00000397004 MPP1Q00013 466 aa14.14□□□□□ -0.15
NUP98-204ENST00000397004 POU5F1BQ06416 359 aa14.14□□□□□ -0.15
NUP98-204ENST00000397004 LIPMQ5VYY2 423 aa14.14□□□□□ -0.15
NUP98-204ENST00000397004 ALKAL1Q6UXT8 129 aa14.14□□□□□ -0.15
NUP98-204ENST00000397004 SLC41A1Q8IVJ1 513 aa14.14□□□□□ -0.15
NUP98-204ENST00000397004 CNTD1Q8N815 330 aa14.14□□□□□ -0.15
NUP98-204ENST00000397004 STYXQ8WUJ0 223 aa14.14□□□□□ -0.15
NUP98-204ENST00000397004 PDCD6IPQ8WUM4 868 aaKnown RBP14.14□□□□□ -0.15
NUP98-204ENST00000397004 FAM149B1Q96BN6 582 aa14.14□□□□□ -0.15
NUP98-204ENST00000397004 SNX27Q96L92 541 aa14.14□□□□□ -0.15
NUP98-204ENST00000397004 GPR22Q99680 433 aa14.14□□□□□ -0.15
NUP98-204ENST00000397004 NAT9Q9BTE0 207 aa14.14□□□□□ -0.15
NUP98-204ENST00000397004 MRPL1Q9BYD6 325 aaKnown RBP14.14□□□□□ -0.15
NUP98-204ENST00000397004 PRORSD1PA6NEY8 169 aa14.14□□□□□ -0.15
NUP98-204ENST00000397004 SDHDO14521 159 aa14.14□□□□□ -0.15
NUP98-204ENST00000397004 GRM5P41594 1212 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms