RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 FIS1Q9Y3D6 152 aa24.38■■□□□ 1.49
CSNK1E-203ENST00000396832 TMEM114B3SHH9 223 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 MATN2O00339 956 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 SERPINB7O75635 380 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 JUNP05412 331 aaKnown RBP24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 COL6A2P12110 1019 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 ARSAP15289 507 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 PGAM1P18669 254 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 BTG3Q14201 252 aaPredicted RBP24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 DPYSL2Q16555 572 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 SETD3Q86TU7 594 aaPredicted RBP24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 SPATA6LQ8N4H0 392 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 MFSD3Q96ES6 412 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 PRDM16Q9HAZ2 1276 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 CYP3A43Q9HB55 503 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 BMP10O95393 424 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 OXCT1P55809 520 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 CTBSQ01459 385 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 ITGA7Q13683 1181 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 FSTL4Q6MZW2 842 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 DNAAF3Q8N9W5 541 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 NPAS2Q99743 824 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 C20orf96Q9NUD7 363 aaPredicted RBP24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 ADA2Q9NZK5 511 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 A0A096LPK6 155 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 IGKV6-21A0A0C4DH24 114 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 TRIM13O60858 407 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 VAPBO95292 243 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 TPH1P17752 444 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 ESRRGP62508 458 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 PID1Q7Z2X4 250 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 FIBCD1Q8N539 461 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 HM13Q8TCT9 377 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 GATA5Q9BWX5 397 aaPredicted RBP24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 SELENONQ9NZV5 590 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 SLC8A2Q9UPR5 921 aa24.37■■□□□ 1.49
CSNK1E-203ENST00000396832 CITO14578 2027 aa24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 HDAC3O15379 428 aa24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 BAG6P46379 1132 aa24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 INCA1Q0VD86 236 aa24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 SEL1L3Q68CR1 1132 aa24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 FASTKD5Q7L8L6 764 aaKnown RBP24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 SULF1Q8IWU6 871 aa24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 CPSF7Q8N684 471 aaKnown RBP24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 VPS33BQ9H267 617 aa24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 SNX13Q9Y5W8 968 aa24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 TMX2-CTNND1H3BSU7 103 aa24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 PSMD12O00232 456 aaPredicted RBP24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 NME3Q13232 169 aa24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 CPNE9Q8IYJ1 553 aa24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 ZNF567Q8N184 647 aa24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 DQX1Q8TE96 717 aaKnown RBP24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 C18orf25Q96B23 403 aaPredicted RBP24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 CIB1Q99828 191 aa24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 SLC38A7Q9NVC3 462 aa24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 MORF4L1Q9UBU8 362 aa24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 COQ6Q9Y2Z9 468 aa24.36■■□□□ 1.49
CSNK1E-203ENST00000396832 GP5P40197 560 aa24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 ARL4AP40617 200 aa24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 GARSP41250 739 aaKnown RBP24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 ACADVLP49748 655 aa24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 PTK2BQ14289 1009 aa24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 SLC35F5Q8WV83 523 aa24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 SREK1Q8WXA9 508 aaKnown RBP24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 PCDHAC1Q9H158 963 aa24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 PRDM12Q9H4Q4 367 aa24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 CDC14AQ9UNH5 594 aa24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 TNS1Q9HBL0 1735 aaKnown RBP24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 KPNA7A9QM74 516 aa24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 DPYSL4O14531 572 aa24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 PHGDHO43175 533 aaKnown RBP24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 HMOX2P30519 316 aa24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 RBP5P82980 135 aa24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 MTX3Q5HYI7 312 aa24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 ZNF618Q5T7W0 954 aa24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 SNX31Q8N9S9 440 aa24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 FAM47BQ8NA70 645 aa24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 THAP11Q96EK4 314 aa24.35■■□□□ 1.49
CSNK1E-203ENST00000396832 FUOMA2VDF0 154 aa24.34■■□□□ 1.49
CSNK1E-203ENST00000396832 TRIM38O00635 465 aa24.34■■□□□ 1.49
CSNK1E-203ENST00000396832 POLBP06746 335 aa24.34■■□□□ 1.49
CSNK1E-203ENST00000396832 ZBED5Q49AG3 693 aa24.34■■□□□ 1.49
CSNK1E-203ENST00000396832 CHST13Q8NET6 341 aa24.34■■□□□ 1.49
CSNK1E-203ENST00000396832 ABHD8Q96I13 439 aa24.34■■□□□ 1.49
CSNK1E-203ENST00000396832 KLHL8Q9P2G9 620 aaPredicted RBP24.34■■□□□ 1.49
CSNK1E-203ENST00000396832 C19orf81C9J6K1 198 aa24.34■■□□□ 1.49
CSNK1E-203ENST00000396832 RPL14P50914 215 aaKnown RBP24.34■■□□□ 1.49
CSNK1E-203ENST00000396832 PRAMEP78395 509 aa24.34■■□□□ 1.49
CSNK1E-203ENST00000396832 NAB1Q13506 487 aa24.34■■□□□ 1.49
CSNK1E-203ENST00000396832 ZNF460Q14592 562 aa24.34■■□□□ 1.49
CSNK1E-203ENST00000396832 GADL1Q6ZQY3 521 aa24.34■■□□□ 1.49
CSNK1E-203ENST00000396832 ASB9Q96DX5 294 aa24.34■■□□□ 1.49
CSNK1E-203ENST00000396832 C12orf42Q96LP6 360 aa24.34■■□□□ 1.49
CSNK1E-203ENST00000396832 ZNF385DQ9H6B1 395 aa24.34■■□□□ 1.49
CSNK1E-203ENST00000396832 ZBTB26Q9HCK0 441 aa24.34■■□□□ 1.49
CSNK1E-203ENST00000396832 SLC39A10Q9ULF5 831 aa24.34■■□□□ 1.49
CSNK1E-203ENST00000396832 SHROOM3Q8TF72 1996 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 TMEM233B4DJY2 109 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 FBP2O00757 339 aa24.33■■□□□ 1.49
CSNK1E-203ENST00000396832 SLC22A2O15244 555 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms