RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 CD38P28907 300 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 CDH5P33151 784 aaPredicted RBP10.61□□□□□ -0.71
NEDD8-202ENST00000396828 ADPRHP54922 357 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 NOMO3P69849 1222 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 BNIP3Q12983 259 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 SMAD1Q15797 465 aaKnown RBP10.61□□□□□ -0.71
NEDD8-202ENST00000396828 IFI16Q16666 785 aaKnown RBP10.61□□□□□ -0.71
NEDD8-202ENST00000396828 POM121L1PQ3SYA9 428 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 SOWAHCQ53LP3 525 aaPredicted RBP10.61□□□□□ -0.71
NEDD8-202ENST00000396828 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.61□□□□□ -0.71
NEDD8-202ENST00000396828 BEND5Q7L4P6 421 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 C14orf80Q86SX3 495 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 ERICH1Q86X53 443 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 REXO1L1PQ8IX06 675 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 DEFB106AQ8N104 65 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 C17orf53Q8N3J3 647 aaPredicted RBP10.61□□□□□ -0.71
NEDD8-202ENST00000396828 KDM1BQ8NB78 822 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 C1orf131Q8NDD1 294 aaKnown RBP10.61□□□□□ -0.71
NEDD8-202ENST00000396828 OR2T34Q8NGX1 318 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 OR14C36Q8NHC7 312 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 SAP25Q8TEE9 199 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 STK32AQ8WU08 396 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 FRS2Q8WU20 508 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 VCPIP1Q96JH7 1222 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 CALR3Q96L12 384 aaKnown RBP10.61□□□□□ -0.71
NEDD8-202ENST00000396828 BBC3Q96PG8 261 aaPredicted RBP10.61□□□□□ -0.71
NEDD8-202ENST00000396828 CPXM1Q96SM3 734 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 ELF4Q99607 663 aaPredicted RBP10.61□□□□□ -0.71
NEDD8-202ENST00000396828 DDX50Q9BQ39 737 aaKnown RBP10.61□□□□□ -0.71
NEDD8-202ENST00000396828 ACE2Q9BYF1 805 aaPredicted RBP10.61□□□□□ -0.71
NEDD8-202ENST00000396828 SYNCQ9H7C4 482 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 POPDC2Q9HBU9 364 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 ANLNQ9NQW6 1124 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 TAS2R14Q9NYV8 317 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 SCML1Q9UN30 329 aa10.61□□□□□ -0.71
NEDD8-202ENST00000396828 ARID1BQ8NFD5 2236 aaPredicted RBP10.61□□□□□ -0.71
NEDD8-202ENST00000396828 TYW5A2RUC4 315 aaKnown RBP10.6□□□□□ -0.71
NEDD8-202ENST00000396828 LRRC72A6NJI9 287 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 BTNL10A8MVZ5 291 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 KIF5CO60282 957 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 ZNF500O60304 480 aaPredicted RBP10.6□□□□□ -0.71
NEDD8-202ENST00000396828 RNASEH1O60930 286 aaKnown RBP10.6□□□□□ -0.71
NEDD8-202ENST00000396828 APOEP02649 317 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 GOT1P17174 413 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 TFE3P19532 575 aaPredicted RBP10.6□□□□□ -0.71
NEDD8-202ENST00000396828 ABCB4P21439 1286 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 MAT2AP31153 395 aaKnown RBP10.6□□□□□ -0.71
NEDD8-202ENST00000396828 ACADSBP45954 432 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 NAP1L1P55209 391 aaKnown RBP10.6□□□□□ -0.71
NEDD8-202ENST00000396828 C21orf59P57076 290 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 OTUD1Q5VV17 481 aaPredicted RBP10.6□□□□□ -0.71
NEDD8-202ENST00000396828 FBXL22Q6P050 247 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 FAM183BPQ6ZVS7 135 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 SND1Q7KZF4 910 aaKnown RBP eCLIP10.6□□□□□ -0.71
NEDD8-202ENST00000396828 PDZD3Q86UT5 571 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 SPATS2Q86XZ4 545 aaKnown RBP10.6□□□□□ -0.71
NEDD8-202ENST00000396828 PHF13Q86YI8 300 aaPredicted RBP10.6□□□□□ -0.71
NEDD8-202ENST00000396828 RHOT2Q8IXI1 618 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 MCOLN2Q8IZK6 566 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 RNF10Q8N5U6 811 aaKnown RBP10.6□□□□□ -0.71
NEDD8-202ENST00000396828 EID2Q8N6I1 236 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 ZNF557Q8N988 423 aaPredicted RBP10.6□□□□□ -0.71
NEDD8-202ENST00000396828 FAM131CQ96AQ9 280 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 ZNF653Q96CK0 615 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 SERAC1Q96JX3 654 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 BTN2A3PQ96KV6 586 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 SLC2A13Q96QE2 648 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 PACSIN1Q9BY11 444 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 AASDHPPTQ9NRN7 309 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.6□□□□□ -0.712e-6■■■■■ 42.9
NEDD8-202ENST00000396828 ADAM22Q9P0K1 906 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 FTSJ1Q9UET6 329 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 FZD4Q9ULV1 537 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 GUCA1BQ9UMX6 200 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 CA5BQ9Y2D0 317 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 SNX10Q9Y5X0 201 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 COL5A1P20908 1838 aaPredicted RBP10.6□□□□□ -0.71
NEDD8-202ENST00000396828 CFAP46Q8IYW2 2715 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 KNTC1P50748 2209 aa10.6□□□□□ -0.71
NEDD8-202ENST00000396828 MYLKQ15746 1914 aa10.59□□□□□ -0.71
NEDD8-202ENST00000396828 TBC1D3DA0A087WVF3 549 aa10.59□□□□□ -0.71
NEDD8-202ENST00000396828 TBC1D3IA0A087WXS9 549 aa10.59□□□□□ -0.71
NEDD8-202ENST00000396828 TBC1D3EA0A087X179 549 aa10.59□□□□□ -0.71
NEDD8-202ENST00000396828 TBC1D3KA0A087X1G2 549 aa10.59□□□□□ -0.71
NEDD8-202ENST00000396828 A0A0A6YYK5 440 aaPredicted RBP10.59□□□□□ -0.71
NEDD8-202ENST00000396828 RCCD1A6NED2 376 aa10.59□□□□□ -0.71
NEDD8-202ENST00000396828 TBC1D3FA6NER0 549 aaPredicted RBP10.59□□□□□ -0.71
NEDD8-202ENST00000396828 TBC1D3LB9A6J9 549 aa10.59□□□□□ -0.71
NEDD8-202ENST00000396828 F5H5T6 163 aa10.59□□□□□ -0.71
NEDD8-202ENST00000396828 KIF2AO00139 706 aaPredicted RBP10.59□□□□□ -0.71
NEDD8-202ENST00000396828 TLR4O00206 839 aa10.59□□□□□ -0.71
NEDD8-202ENST00000396828 SART1O43290 800 aaKnown RBP10.59□□□□□ -0.71
NEDD8-202ENST00000396828 LATO43561 262 aa10.59□□□□□ -0.71
NEDD8-202ENST00000396828 MOCS3O95396 460 aa10.59□□□□□ -0.71
NEDD8-202ENST00000396828 MT-CO1P00395 513 aa10.59□□□□□ -0.71
NEDD8-202ENST00000396828 TUBB4AP04350 444 aa10.59□□□□□ -0.71
NEDD8-202ENST00000396828 ERBB2P04626 1255 aa10.59□□□□□ -0.71
NEDD8-202ENST00000396828 TBC1D3HP0C7X1 549 aa10.59□□□□□ -0.71
NEDD8-202ENST00000396828 C5AR1P21730 350 aa10.59□□□□□ -0.71
NEDD8-202ENST00000396828 MMP8P22894 467 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms