RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 CALML6Q8TD86 181 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 SLC26A7Q8TE54 656 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 ACE2Q9BYF1 805 aaPredicted RBP11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 STN1Q9H668 368 aaKnown RBP11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 ANLNQ9NQW6 1124 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 NDE1Q9NXR1 346 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 HMX2A2RU54 273 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 TRAFD1O14545 582 aaPredicted RBP11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 MATN3O15232 486 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 DCXO43602 365 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 MGEA5O60502 916 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 ZNF623O75123 536 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 PSMG1O95456 288 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 GRK4P32298 578 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 CD68P34810 354 aaPredicted RBP11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 RPAINQ86UA6 219 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 KCTD4Q8WVF5 259 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 EXT2Q93063 718 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 PTCD3Q96EY7 689 aaKnown RBP11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 SUSD3Q96L08 255 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 HAPLN3Q96S86 360 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 TRPV6Q9H1D0 765 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 PLAC1Q9HBJ0 212 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 MAN1C1Q9NR34 630 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 SLC12A8A0AV02 714 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 DDHD2O94830 711 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 FGF3P11487 239 aaPredicted RBP11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 TYMPP19971 482 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 CCND3P30281 292 aaPredicted RBP11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 SERPINB5P36952 375 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 CD151P48509 253 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 SLC25A3Q00325 362 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 SEL1L3Q68CR1 1132 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 MRPL10Q7Z7H8 261 aaKnown RBP11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 LRRTM3Q86VH5 581 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 RHOJQ9H4E5 214 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 CXorf56Q9H5V9 222 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 TMEM30AQ9NV96 361 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 PCDHB8Q9UN66 801 aa11.74□□□□□ -0.53
PDXDC1-202ENST00000396410 CA12O43570 354 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 GPC4O75487 556 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 YWHAQP27348 245 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 CNGA3Q16281 694 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 TMEM135Q86UB9 458 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 MON1AQ86VX9 555 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 SPATA6LQ8N4H0 392 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 MIPEPQ99797 713 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 MMADHCQ9H3L0 296 aaPredicted RBP11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 TCF7L2Q9NQB0 619 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 ACSS2Q9NR19 701 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 PCDHB7Q9Y5E2 793 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 HOXD10P28358 340 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 MAXP61244 160 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 SLC34A1Q06495 639 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 PDCD2Q16342 344 aaPredicted RBP11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 SNX30Q5VWJ9 437 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 ZNF280DQ6N043 979 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 SAPCD2Q86UD0 394 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 SPON2Q9BUD6 331 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 CDYLQ9Y232 598 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 COMMD10Q9Y6G5 202 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 AIM2O14862 343 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 SNNO75324 88 aaPredicted RBP11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 C1QAP02745 245 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 ITGB1P05556 798 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 TPBGLP0DKB5 382 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 PMLP29590 882 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 NAGLUP54802 743 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 ART3Q13508 389 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 CSHL1Q14406 222 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 TRMT5Q32P41 509 aaKnown RBP11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 PM20D1Q6GTS8 502 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 ESRP1Q6NXG1 681 aaKnown RBP11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 FAM171BQ6P995 826 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 POTEHQ6S545 545 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 PTAR1Q7Z6K3 402 aaPredicted RBP11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 PLD6Q8N2A8 252 aaKnown RBP11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 PRKD2Q9BZL6 878 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 VCXQ9H320 206 aa11.73□□□□□ -0.53
PDXDC1-202ENST00000396410 STAMBPO95630 424 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 CD86P42081 329 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 GRIA4P48058 902 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 FAM83EQ2M2I3 478 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 SLC24A5Q71RS6 500 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 CLPTM1LQ96KA5 538 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 ZYG11BQ9C0D3 744 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 CCDC68Q9H2F9 335 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 COG4Q9H9E3 785 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 CSNK1G1Q9HCP0 422 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 TRIP12Q14669 1992 aaPredicted RBP11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 HEATR9A2RTY3 570 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 TMEM114B3SHH9 223 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 HHLA1C9JL84 531 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 F8W810 466 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 SIN3BO75182 1162 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 PIGNO95427 931 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 MYCP01106 439 aaPredicted RBP11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 MPP1Q00013 466 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 MMEL1Q495T6 779 aa11.72□□□□□ -0.53
PDXDC1-202ENST00000396410 RAP1GAP2Q684P5 730 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms