RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 E7ENQ6 273 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 HNRNPCL1O60812 293 aaKnown RBP9.45□□□□□ -0.9
NDE1-201ENST00000396354 DNAJA2O60884 412 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 HUS1O60921 280 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 HOXC8P31273 242 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 GRIA4P48058 902 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 THOP1P52888 689 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 PURAQ00577 322 aaKnown RBP9.45□□□□□ -0.9
NDE1-201ENST00000396354 GRM3Q14832 879 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 ARL13AQ5H913 290 aaPredicted RBP9.45□□□□□ -0.9
NDE1-201ENST00000396354 SLC9A4Q6AI14 798 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 NET1Q7Z628 596 aaPredicted RBP9.45□□□□□ -0.9
NDE1-201ENST00000396354 LRRC52Q8N7C0 313 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 APPL2Q8NEU8 664 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 ARNTL2Q8WYA1 636 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 ZNF670Q9BS34 389 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 GATA5Q9BWX5 397 aaPredicted RBP9.45□□□□□ -0.9
NDE1-201ENST00000396354 KLHL4Q9C0H6 718 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 LIN28AQ9H9Z2 209 aaKnown RBP9.45□□□□□ -0.9
NDE1-201ENST00000396354 GIMAP2Q9UG22 337 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 USP3Q9Y6I4 520 aa9.45□□□□□ -0.9
NDE1-201ENST00000396354 CASTOR2A6NHX0 329 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 RRN3P2A6NIE6 340 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 C9IYK1 514 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 F8W810 466 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 AURKAO14965 403 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 SNUPNO95149 360 aaKnown RBP9.44□□□□□ -0.9
NDE1-201ENST00000396354 CPOXP36551 454 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 CCNG1P51959 295 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 MAPK10P53779 464 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 GJA9P57773 515 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 PLIN5Q00G26 463 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 FOLH1Q04609 750 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 CNPY1Q3B7I2 92 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 FBXL19Q6PCT2 694 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 KCNMB4Q86W47 210 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 IFNEQ86WN2 208 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 NT5DC4Q86YG4 428 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 ST13P4Q8IZP2 240 aaPredicted RBP9.44□□□□□ -0.9
NDE1-201ENST00000396354 NPWQ8N729 165 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 BEST2Q8NFU1 509 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 B3GALT6Q96L58 329 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 NMRAL1Q9HBL8 299 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 CCDC167Q9P0B6 97 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 DTNAQ9Y4J8 743 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 SCN10AQ9Y5Y9 1956 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 C2orf72A6NCS6 295 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 GSRP00390 522 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 VCLP18206 1134 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 MAXP61244 160 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 SREBF2Q12772 1141 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 KLF10Q13118 480 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 MPP3Q13368 585 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 GK5Q6ZS86 529 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 AMIGO2Q86SJ2 522 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.44□□□□□ -0.9
NDE1-201ENST00000396354 RAB3IL1Q8TBN0 382 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 URGCPQ8TCY9 931 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 NAT14Q8WUY8 206 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 CENPIQ92674 756 aaPredicted RBP9.44□□□□□ -0.9
NDE1-201ENST00000396354 ABTB1Q969K4 478 aaPredicted RBP9.44□□□□□ -0.9
NDE1-201ENST00000396354 FERMT1Q9BQL6 677 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 SLC2A6Q9UGQ3 507 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 ARHGAP26Q9UNA1 814 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 DERAQ9Y315 318 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 TRDMT1O14717 391 aaKnown RBP9.44□□□□□ -0.9
NDE1-201ENST00000396354 MSI1O43347 362 aaKnown RBP9.44□□□□□ -0.9
NDE1-201ENST00000396354 PGK1P00558 417 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 MT-ND1P03886 318 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 FYNP06241 537 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 PIRTP0C851 137 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 KCNE1P15382 129 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 GP5P40197 560 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 GRIA2P42262 883 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 RPL34P49207 117 aaKnown RBP9.44□□□□□ -0.9
NDE1-201ENST00000396354 BST2Q10589 180 aaKnown RBP9.44□□□□□ -0.9
NDE1-201ENST00000396354 WASHC5Q12768 1159 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 ZBTB17Q13105 803 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 CSHL1Q14406 222 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 PDK3Q15120 406 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 KYAT1Q16773 422 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 C17orf99Q6UX52 265 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 CXCL17Q6UXB2 119 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 ANKRD52Q8NB46 1076 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.44□□□□□ -0.9
NDE1-201ENST00000396354 CMTM5Q96DZ9 223 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 VPS39Q96JC1 886 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 PPP1R10Q96QC0 940 aaKnown RBP9.44□□□□□ -0.9
NDE1-201ENST00000396354 CRTAC1Q9NQ79 661 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 RHBDL2Q9NX52 303 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 XPR1Q9UBH6 696 aa9.44□□□□□ -0.9
NDE1-201ENST00000396354 SNNO75324 88 aaPredicted RBP9.43□□□□□ -0.9
NDE1-201ENST00000396354 PGAM1P18669 254 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 GARSP41250 739 aaKnown RBP9.43□□□□□ -0.9
NDE1-201ENST00000396354 SERPINB9P50453 376 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 COG7P83436 770 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 NOGQ13253 232 aa9.43□□□□□ -0.9
NDE1-201ENST00000396354 FSCN1Q16658 493 aaKnown RBP9.43□□□□□ -0.9
NDE1-201ENST00000396354 LSM12Q3MHD2 195 aaKnown RBP9.43□□□□□ -0.9
NDE1-201ENST00000396354 SH2D4BQ5SQS7 431 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms