RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 LSM7Q9UK45 103 aaKnown RBP25.01■■□□□ 1.59
CTF1-202ENST00000395019 A0A1B0GVM2 712 aa25■■□□□ 1.59
CTF1-202ENST00000395019 GRXCR2A6NFK2 248 aa25■■□□□ 1.59
CTF1-202ENST00000395019 TCAF2A6NFQ2 919 aa25■■□□□ 1.59
CTF1-202ENST00000395019 SMIM23A6NLE4 172 aa25■■□□□ 1.59
CTF1-202ENST00000395019 J3KR12 359 aa25■■□□□ 1.59
CTF1-202ENST00000395019 GFRA2O00451 464 aa25■■□□□ 1.59
CTF1-202ENST00000395019 DDX6P26196 483 aaKnown RBP eCLIP25■■□□□ 1.59
CTF1-202ENST00000395019 MMP13P45452 471 aa25■■□□□ 1.59
CTF1-202ENST00000395019 SGSHP51688 502 aa25■■□□□ 1.59
CTF1-202ENST00000395019 GYS2P54840 703 aa25■■□□□ 1.59
CTF1-202ENST00000395019 TNFAIP8L3Q5GJ75 292 aa25■■□□□ 1.59
CTF1-202ENST00000395019 CAPN12Q6ZSI9 719 aa25■■□□□ 1.59
CTF1-202ENST00000395019 OTOP3Q7RTS5 596 aa25■■□□□ 1.59
CTF1-202ENST00000395019 MAFAQ8NHW3 353 aaPredicted RBP25■■□□□ 1.59
CTF1-202ENST00000395019 SLC46A2Q9BY10 475 aa25■■□□□ 1.59
CTF1-202ENST00000395019 PPCSQ9HAB8 311 aa25■■□□□ 1.59
CTF1-202ENST00000395019 RABGEF1Q9UJ41 708 aa25■■□□□ 1.59
CTF1-202ENST00000395019 NOVA2Q9UNW9 492 aaKnown RBP25■■□□□ 1.59
CTF1-202ENST00000395019 ZNF510Q9Y2H8 683 aa25■■□□□ 1.59
CTF1-202ENST00000395019 NUP210Q8TEM1 1887 aaPredicted RBP24.99■■□□□ 1.59
CTF1-202ENST00000395019 HLA-DQB2P05538 268 aa24.99■■□□□ 1.59
CTF1-202ENST00000395019 ACVRL1P37023 503 aa24.99■■□□□ 1.59
CTF1-202ENST00000395019 GNA12Q03113 381 aa24.99■■□□□ 1.59
CTF1-202ENST00000395019 TNK2Q07912 1038 aa24.99■■□□□ 1.59
CTF1-202ENST00000395019 HTR3DQ70Z44 454 aa24.99■■□□□ 1.59
CTF1-202ENST00000395019 TEX26Q8N6G2 289 aa24.99■■□□□ 1.59
CTF1-202ENST00000395019 NSMCE1Q8WV22 266 aa24.99■■□□□ 1.59
CTF1-202ENST00000395019 OXNAD1Q96HP4 312 aaPredicted RBP24.99■■□□□ 1.59
CTF1-202ENST00000395019 EBNA1BP2Q99848 306 aaKnown RBP24.99■■□□□ 1.59
CTF1-202ENST00000395019 STMN4Q9H169 189 aaPredicted RBP24.99■■□□□ 1.59
CTF1-202ENST00000395019 POMKQ9H5K3 350 aa24.99■■□□□ 1.59
CTF1-202ENST00000395019 FETUBQ9UGM5 382 aa24.99■■□□□ 1.59
CTF1-202ENST00000395019 AAR2Q9Y312 384 aaKnown RBP24.99■■□□□ 1.59
CTF1-202ENST00000395019 USP15Q9Y4E8 981 aaPredicted RBP24.99■■□□□ 1.59
CTF1-202ENST00000395019 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.98■■□□□ 1.59
CTF1-202ENST00000395019 EXOC1LA0A1B0GW35 172 aa24.98■■□□□ 1.59
CTF1-202ENST00000395019 ILVBLA1L0T0 632 aa24.98■■□□□ 1.59
CTF1-202ENST00000395019 SOBPA7XYQ1 873 aa24.98■■□□□ 1.59
CTF1-202ENST00000395019 TSPAN3O60637 253 aa24.98■■□□□ 1.59
CTF1-202ENST00000395019 CPP00450 1065 aa24.98■■□□□ 1.59
CTF1-202ENST00000395019 AGTP01019 485 aa24.98■■□□□ 1.59
CTF1-202ENST00000395019 GSTA2P09210 222 aa24.98■■□□□ 1.59
CTF1-202ENST00000395019 ZNF177Q13360 481 aaPredicted RBP24.98■■□□□ 1.59
CTF1-202ENST00000395019 SPARCL1Q14515 664 aa24.98■■□□□ 1.59
CTF1-202ENST00000395019 MARC1Q5VT66 337 aa24.98■■□□□ 1.59
CTF1-202ENST00000395019 CES5AQ6NT32 575 aa24.98■■□□□ 1.59
CTF1-202ENST00000395019 SETD3Q86TU7 594 aaPredicted RBP24.98■■□□□ 1.59
CTF1-202ENST00000395019 ZNF354CQ86Y25 554 aa24.98■■□□□ 1.59
CTF1-202ENST00000395019 TDRPQ86YL5 185 aa24.98■■□□□ 1.59
CTF1-202ENST00000395019 RIBC1Q8N443 379 aaPredicted RBP24.98■■□□□ 1.59
CTF1-202ENST00000395019 ZSWIM3Q96MP5 696 aa24.98■■□□□ 1.59
CTF1-202ENST00000395019 ACSS3Q9H6R3 686 aa24.98■■□□□ 1.59
CTF1-202ENST00000395019 LRRC40Q9H9A6 602 aa24.98■■□□□ 1.59
CTF1-202ENST00000395019 ZC3H7BQ9UGR2 993 aaKnown RBP24.98■■□□□ 1.59
CTF1-202ENST00000395019 ARHGAP26Q9UNA1 814 aa24.98■■□□□ 1.59
CTF1-202ENST00000395019 TBC1D30Q9Y2I9 924 aa24.98■■□□□ 1.59
CTF1-202ENST00000395019 SDR42E2A6NKP2 422 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 PRAMEF11O60813 436 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 CDH16O75309 829 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 ANXA9O76027 345 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 NEBLO76041 1014 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 CBX2Q14781 532 aaPredicted RBP24.97■■□□□ 1.59
CTF1-202ENST00000395019 EMC10Q5UCC4 262 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 GET4Q7L5D6 327 aaPredicted RBP24.97■■□□□ 1.59
CTF1-202ENST00000395019 MPP5Q8N3R9 675 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 FBF1Q8TES7 1133 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 SUSD6Q92537 303 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 HLA-CQ95604 372 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 CASS4Q9NQ75 786 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 CFAP97Q9P2B7 532 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 LGALS13Q9UHV8 139 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 ADAM21Q9UKJ8 722 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 MRPS23Q9Y3D9 190 aaKnown RBP24.97■■□□□ 1.59
CTF1-202ENST00000395019 SH3BP1Q9Y3L3 701 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 RHOCP08134 193 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 FSHRP23945 695 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 KLHL38Q2WGJ6 581 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 ATAT1Q5SQI0 421 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 GPR158Q5T848 1215 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 HJURPQ8NCD3 748 aaPredicted RBP24.97■■□□□ 1.59
CTF1-202ENST00000395019 OR52K2Q8NGK3 314 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 ZNF599Q96NL3 588 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 TASP1Q9H6P5 420 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 PDFQ9HBH1 243 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 EURLQ9NYK6 297 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 SLC24A2Q9UI40 661 aa24.97■■□□□ 1.59
CTF1-202ENST00000395019 A0A0D9SEW6 157 aa24.96■■□□□ 1.59
CTF1-202ENST00000395019 NR1D1P20393 614 aa24.96■■□□□ 1.59
CTF1-202ENST00000395019 GCAP28676 217 aa24.96■■□□□ 1.59
CTF1-202ENST00000395019 GEMP55040 296 aa24.96■■□□□ 1.59
CTF1-202ENST00000395019 MAGOHP61326 146 aaKnown RBP24.96■■□□□ 1.59
CTF1-202ENST00000395019 TFF2Q03403 129 aa24.96■■□□□ 1.59
CTF1-202ENST00000395019 SLC10A7Q0GE19 358 aa24.96■■□□□ 1.59
CTF1-202ENST00000395019 RASA2Q15283 850 aa24.96■■□□□ 1.59
CTF1-202ENST00000395019 ARHGAP15Q53QZ3 475 aa24.96■■□□□ 1.59
CTF1-202ENST00000395019 CPXM2Q8N436 756 aa24.96■■□□□ 1.59
CTF1-202ENST00000395019 OR7D4Q8NG98 312 aa24.96■■□□□ 1.59
CTF1-202ENST00000395019 OR52K1Q8NGK4 314 aa24.96■■□□□ 1.59
CTF1-202ENST00000395019 CFAP36Q96G28 342 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms