RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 MAT2AP31153 395 aaKnown RBP9.05□□□□□ -0.96
ATG4A-205ENST00000394892 GKP32189 559 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 CHRNA3P32297 505 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 GNA12Q03113 381 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 MTA1Q13330 715 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 FGL2Q14314 439 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 SUZ12Q15022 739 aaKnown RBP9.05□□□□□ -0.96
ATG4A-205ENST00000394892 ARSIQ5FYB1 569 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 CAVIN1Q6NZI2 390 aaKnown RBP9.05□□□□□ -0.96
ATG4A-205ENST00000394892 C22orf39Q6P5X5 142 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 LRRC31Q6UY01 552 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 KDM7AQ6ZMT4 941 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 TRIM72Q6ZMU5 477 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 LEKR1Q6ZMV7 388 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 CYP4V2Q6ZWL3 525 aaPredicted RBP9.05□□□□□ -0.96
ATG4A-205ENST00000394892 STRADAQ7RTN6 431 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 ZNF571Q7Z3V5 609 aaPredicted RBP9.05□□□□□ -0.96
ATG4A-205ENST00000394892 GATAD2AQ86YP4 633 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 ATP11CQ8NB49 1132 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 C3orf20Q8ND61 904 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 FAM172AQ8WUF8 416 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 OR8D1Q8WZ84 308 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 ARHGEF2Q92974 986 aaKnown RBP9.05□□□□□ -0.96
ATG4A-205ENST00000394892 CDC6Q99741 560 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 BPIFA3Q9BQP9 254 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 SPON2Q9BUD6 331 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 SLC25A13Q9UJS0 675 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 FCF1Q9Y324 198 aaKnown RBP9.05□□□□□ -0.96
ATG4A-205ENST00000394892 DAAM1Q9Y4D1 1078 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 PCDHGB2Q9Y5G2 931 aa9.05□□□□□ -0.96
ATG4A-205ENST00000394892 LAMA5O15230 3695 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 TBC1D3DA0A087WVF3 549 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 TBC1D3IA0A087WXS9 549 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 TBC1D3EA0A087X179 549 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 TBC1D3KA0A087X1G2 549 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 A0A1B0GTH6 734 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 TBC1D3FA6NER0 549 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-205ENST00000394892 LRRC72A6NJI9 287 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 LRRC53A6NM62 1247 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 TBC1D3LB9A6J9 549 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 DDX3XO00571 662 aaKnown RBP eCLIP9.04□□□□□ -0.96
ATG4A-205ENST00000394892 ALOX15BO15296 676 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 ATMINO43313 823 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-205ENST00000394892 PCDHGA12O60330 932 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 LEFTY1O75610 366 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 TBC1D3HP0C7X1 549 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 PRLRP16471 622 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 RHOQP17081 205 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 CDK11BP21127 795 aaKnown RBP9.04□□□□□ -0.96
ATG4A-205ENST00000394892 GPD1P21695 349 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 CD38P28907 300 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 SDC4P31431 198 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 NNMTP40261 264 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 NSFP46459 744 aaKnown RBP9.04□□□□□ -0.96
ATG4A-205ENST00000394892 SERPINH1P50454 418 aaKnown RBP9.04□□□□□ -0.96
ATG4A-205ENST00000394892 ZNF143P52747 638 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-205ENST00000394892 CLDN6P56747 220 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 NXPH1P58417 271 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 BNIP3Q12983 259 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 CA9Q16790 459 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 COL28A1Q2UY09 1125 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 ZNF284Q2VY69 593 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 C6orf118Q5T5N4 469 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 TBC1D3GQ6DHY5 549 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 TBC1D3CQ6IPX1 549 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 ACAD10Q6JQN1 1059 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 TRIM69Q86WT6 500 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 TBC1D3Q8IZP1 549 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-205ENST00000394892 GALNT15Q8N3T1 639 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 TMEM145Q8NBT3 493 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 TMIEQ8NEW7 156 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 GRIN3AQ8TCU5 1115 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 SAP25Q8TEE9 199 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 HNRNPLLQ8WVV9 542 aaKnown RBP9.04□□□□□ -0.96
ATG4A-205ENST00000394892 KLK6Q92876 244 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 NTAN1Q96AB6 310 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 SERAC1Q96JX3 654 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 PCMTD1Q96MG8 357 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-205ENST00000394892 MCEEQ96PE7 176 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 PEBP4Q96S96 227 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 C2orf49Q9BVC5 232 aaPredicted RBP9.04□□□□□ -0.96
ATG4A-205ENST00000394892 ATP13A1Q9HD20 1204 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 TMEM248Q9NWD8 314 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 GPATCH2LQ9NWQ4 482 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 DNAI1Q9UI46 699 aa9.04□□□□□ -0.96
ATG4A-205ENST00000394892 TLR4O00206 839 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 RAD51BO15315 384 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 SLC7A4O43246 635 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 RNGTTO60942 597 aaKnown RBP9.03□□□□□ -0.96
ATG4A-205ENST00000394892 CALB1P05937 261 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 PBX1P40424 430 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 ABL2P42684 1182 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 CLCN6P51797 869 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 KRT83P78385 493 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 MAMLD1Q13495 774 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 NR1I3Q14994 352 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 TEAD4Q15561 434 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 TMEM259Q4ZIN3 620 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 TPRG1LQ5T0D9 272 aa9.03□□□□□ -0.96
ATG4A-205ENST00000394892 HGSNATQ68CP4 663 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms