RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 KLHL10Q6JEL2 608 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 IGF2-ASQ6U949 168 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 KYAT3Q6YP21 454 aaKnown RBP15.73■□□□□ 0.11
CHMP3-202ENST00000393773 ERN2Q76MJ5 926 aaKnown RBP15.73■□□□□ 0.11
CHMP3-202ENST00000393773 PTAR1Q7Z6K3 402 aaPredicted RBP15.73■□□□□ 0.11
CHMP3-202ENST00000393773 LSMEM2Q8N112 164 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 DCAF4L2Q8NA75 395 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 ATP11CQ8NB49 1132 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 GRIN3AQ8TCU5 1115 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 SNRNP27Q8WVK2 155 aaKnown RBP15.73■□□□□ 0.11
CHMP3-202ENST00000393773 KCNE4Q8WWG9 221 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 NELFBQ8WX92 580 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 TTC9Q92623 222 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 RNF34Q969K3 372 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 CCDC114Q96M63 670 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 C2orf49Q9BVC5 232 aaPredicted RBP15.73■□□□□ 0.11
CHMP3-202ENST00000393773 HDAC8Q9BY41 377 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 USP29Q9HBJ7 922 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 UBE2TQ9NPD8 197 aaPredicted RBP15.73■□□□□ 0.11
CHMP3-202ENST00000393773 ANLNQ9NQW6 1124 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 CTNND2Q9UQB3 1225 aa15.73■□□□□ 0.11
CHMP3-202ENST00000393773 CAPN8A6NHC0 703 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 PPP1R3GB7ZBB8 358 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 J3QKU1 62 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 PRNPP04156 253 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 ERBB2P04626 1255 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 RHOCP08134 193 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 NME1P15531 152 aaKnown RBP15.72■□□□□ 0.11
CHMP3-202ENST00000393773 PPP1R2P41236 205 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 KRT83P78385 493 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 SKOR1P84550 965 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 NME3Q13232 169 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 MTA1Q13330 715 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 FGL2Q14314 439 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 FZD2Q14332 565 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 TAF1BQ53T94 588 aaPredicted RBP15.72■□□□□ 0.11
CHMP3-202ENST00000393773 ZNF542PQ5EBM4 170 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 EFHC1Q5JVL4 640 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 ARHGAP40Q5TG30 622 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 GJB7Q6PEY0 223 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 TRIM65Q6PJ69 517 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 PASD1Q8IV76 773 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 IFI44Q8TCB0 444 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 VCPIP1Q96JH7 1222 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 PPP1R13BQ96KQ4 1090 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 TIGD1Q96MW7 591 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 PIGVQ9NUD9 493 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 DNAJC28Q9NX36 388 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.72■□□□□ 0.11
CHMP3-202ENST00000393773 WASF2Q9Y6W5 498 aa15.72■□□□□ 0.11
CHMP3-202ENST00000393773 ZNF821O75541 412 aaPredicted RBP15.71■□□□□ 0.11
CHMP3-202ENST00000393773 TFE3P19532 575 aaPredicted RBP15.71■□□□□ 0.11
CHMP3-202ENST00000393773 TGM2P21980 687 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 CLCN6P51797 869 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 ISXQ2M1V0 245 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 PTPN20Q4JDL3 420 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 C3orf38Q5JPI3 329 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 ZCCHC8Q6NZY4 707 aaKnown RBP15.71■□□□□ 0.11
CHMP3-202ENST00000393773 LINGO4Q6UY18 593 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 Q6ZSR6 202 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 ENOSF1Q7L5Y1 443 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 SLC26A9Q7LBE3 791 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 C1orf131Q8NDD1 294 aaKnown RBP15.71■□□□□ 0.11
CHMP3-202ENST00000393773 FAM174AQ8TBP5 190 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 MAPK15Q8TD08 544 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 BMFQ96LC9 184 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 DUSP23Q9BVJ7 150 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 TNKS2Q9H2K2 1166 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 DYRK4Q9NR20 520 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 THSD1Q9NS62 852 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 ARHGEF38Q9NXL2 777 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 IL36AQ9UHA7 158 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 PCDHGC3Q9UN70 934 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 SATB2Q9UPW6 733 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 FARP1Q9Y4F1 1045 aaPredicted RBP15.71■□□□□ 0.11
CHMP3-202ENST00000393773 SNX10Q9Y5X0 201 aa15.71■□□□□ 0.11
CHMP3-202ENST00000393773 PTPN13Q12923 2485 aa15.71■□□□□ 0.1
CHMP3-202ENST00000393773 ANKRD36A6QL64 1941 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 A0A0D9SEW6 157 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 SPTY2D1-AS1A0A0U1RR47 76 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 BICDL2A1A5D9 508 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 POM121BA6NF01 834 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 NEMP2A6NFY4 417 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 M0QYT0 321 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 RAD51BO15315 384 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 KLK10O43240 276 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 LEFTY1O75610 366 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 PCDH8O95206 1070 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 ADCY5O95622 1261 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 GNA14O95837 355 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 CSF2P04141 144 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 ITGB7P26010 798 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 DUSP3P51452 185 aaPredicted RBP15.7■□□□□ 0.1
CHMP3-202ENST00000393773 NEK3P51956 506 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 HNRNPKP61978 463 aaKnown RBP eCLIP15.7■□□□□ 0.1
CHMP3-202ENST00000393773 APBA1Q02410 837 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 CCDC15Q0P6D6 951 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 TPRG1LQ5T0D9 272 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 KIAA1161Q6NSJ0 714 aa15.7■□□□□ 0.1
CHMP3-202ENST00000393773 GUSBP11Q6P575 273 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms