RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 MRRFQ96E11 262 aaKnown RBP13.8□□□□□ -0.2
SEC13-203ENST00000383801 CABS1Q96KC9 395 aa13.8□□□□□ -0.2
SEC13-203ENST00000383801 FSD1LQ9BXM9 530 aa13.8□□□□□ -0.2
SEC13-203ENST00000383801 POLR1EQ9GZS1 481 aaKnown RBP13.8□□□□□ -0.2
SEC13-203ENST00000383801 ATP13A1Q9HD20 1204 aa13.8□□□□□ -0.2
SEC13-203ENST00000383801 SMYD2Q9NRG4 433 aa13.8□□□□□ -0.2
SEC13-203ENST00000383801 PRKAG3Q9UGI9 489 aa13.8□□□□□ -0.2
SEC13-203ENST00000383801 CEP350Q5VT06 3117 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 ANAPC1Q9H1A4 1944 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.79□□□□□ -0.2
SEC13-203ENST00000383801 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.79□□□□□ -0.2
SEC13-203ENST00000383801 ZCWPW2A0A1B0GU75 182 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 TYW5A2RUC4 315 aaKnown RBP13.79□□□□□ -0.2
SEC13-203ENST00000383801 TRIM49D1C9J1S8 452 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 KDELR3O43731 214 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 PAPSS2O95340 614 aaPredicted RBP13.79□□□□□ -0.2
SEC13-203ENST00000383801 CXCL14O95715 111 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 VIMP08670 466 aaKnown RBP13.79□□□□□ -0.2
SEC13-203ENST00000383801 CNPP09543 421 aaKnown RBP13.79□□□□□ -0.2
SEC13-203ENST00000383801 ALADP13716 330 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 CORO1AP31146 461 aaKnown RBP13.79□□□□□ -0.2
SEC13-203ENST00000383801 RPA3P35244 121 aaPredicted RBP13.79□□□□□ -0.2
SEC13-203ENST00000383801 BMPR1AP36894 532 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 WDR4P57081 412 aaKnown RBP13.79□□□□□ -0.2
SEC13-203ENST00000383801 GNA12Q03113 381 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 ZNF177Q13360 481 aaPredicted RBP13.79□□□□□ -0.2
SEC13-203ENST00000383801 ITIH4Q14624 930 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 UGP2Q16851 508 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 TMEM240Q5SV17 173 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 PACS1Q6VY07 963 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 TAX1BP1Q86VP1 789 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 DENND1CQ8IV53 801 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 TRIM42Q8IWZ5 723 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 CACNA2D3Q8IZS8 1091 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 USP33Q8TEY7 942 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 MRPS31Q92665 395 aaKnown RBP13.79□□□□□ -0.2
SEC13-203ENST00000383801 ATP2A3Q93084 1043 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 IQCGQ9H095 443 aaKnown RBP13.79□□□□□ -0.2
SEC13-203ENST00000383801 RNF38Q9H0F5 515 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 PDFQ9HBH1 243 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 ZMYM5Q9UJ78 669 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 AGO1Q9UL18 857 aaKnown RBP13.79□□□□□ -0.2
SEC13-203ENST00000383801 PTPRSQ13332 1948 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 BRCA2P51587 3418 aa13.79□□□□□ -0.2
SEC13-203ENST00000383801 GOLGA6L7A0A1B0GV03 622 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 J3KR12 359 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 COPEO14579 308 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 TGM5O43548 720 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 SPAG7O75391 227 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 RFPL1O75677 317 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 RB1P06400 928 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 DHRS4L1P0CG22 281 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 DNAJB1P25685 340 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 DDX6P26196 483 aaKnown RBP eCLIP13.78□□□□□ -0.23e-6■□□□□ 8.8
SEC13-203ENST00000383801 SLC6A4P31645 630 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 CRHR1P34998 444 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 NEK3P51956 506 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 OXCT1P55809 520 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 SLC7A9P82251 487 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 MPP7Q5T2T1 576 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 DENND5AQ6IQ26 1287 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 KDELC1Q6UW63 502 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 TMC7Q7Z402 723 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 TMCO2Q7Z6W1 182 aaPredicted RBP13.78□□□□□ -0.2
SEC13-203ENST00000383801 TMEM150AQ86TG1 271 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 LCA5Q86VQ0 697 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 FAM217AQ8IXS0 508 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 LMNTD2Q8IXW0 634 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 LRRC34Q8IZ02 419 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 KLHL23Q8NBE8 558 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 PPHLN1Q8NEY8 458 aaKnown RBP13.78□□□□□ -0.2
SEC13-203ENST00000383801 RAB3IL1Q8TBN0 382 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 TCP10LQ8TDR4 215 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 ISL2Q96A47 359 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 SEC16BQ96JE7 1060 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 MRGPRX2Q96LB1 330 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 KLHL5Q96PQ7 755 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 TGS1Q96RS0 853 aaKnown RBP13.78□□□□□ -0.2
SEC13-203ENST00000383801 ACE2Q9BYF1 805 aaPredicted RBP13.78□□□□□ -0.2
SEC13-203ENST00000383801 IL21Q9HBE4 155 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 DCDC2Q9UHG0 476 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 LSM7Q9UK45 103 aaKnown RBP13.78□□□□□ -0.2
SEC13-203ENST00000383801 ARIH1Q9Y4X5 557 aaPredicted RBP13.78□□□□□ -0.2
SEC13-203ENST00000383801 SLC4A7Q9Y6M7 1214 aa13.78□□□□□ -0.2
SEC13-203ENST00000383801 ZFP37Q9Y6Q3 630 aaPredicted RBP13.78□□□□□ -0.2
SEC13-203ENST00000383801 LOC285095A0A1B0GVY8 99 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 HEATR9A2RTY3 570 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 TCP11X1B4DZS4 312 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 H3BNC9 293 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 TIMM44O43615 452 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 ATP9BO43861 1147 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 SIN3BO75182 1162 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 MT-CYBP00156 380 aaPredicted RBP13.77□□□□□ -0.21
SEC13-203ENST00000383801 IL1BP01584 269 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 KLKB1P03952 638 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 PYGBP11216 843 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 MBL2P11226 248 aaPredicted RBP13.77□□□□□ -0.21
SEC13-203ENST00000383801 HDCP19113 662 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 WNT3AP56704 352 aa13.77□□□□□ -0.21
SEC13-203ENST00000383801 SLC10A7Q0GE19 358 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms