RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 GH1P01241 217 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 GAAP10253 952 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 CETPP11597 493 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 HARSP12081 509 aaKnown RBP3.88□□□□□ -1.79
SMC6-202ENST00000381272 ETS1P14921 441 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 DPEP1P16444 411 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 KCNA3P22001 575 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 IVDP26440 423 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 HMGB2P26583 209 aaKnown RBP3.88□□□□□ -1.79
SMC6-202ENST00000381272 CCND2P30279 289 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 SFNP31947 248 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 GTF2H1P32780 548 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 NF2P35240 595 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 PIK3CAP42336 1068 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 NSFP46459 744 aaKnown RBP3.88□□□□□ -1.79
SMC6-202ENST00000381272 GPR15P49685 360 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 LIG4P49917 911 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 PRKCEQ02156 737 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 GHRHRQ02643 423 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 PTK6Q13882 451 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 PLCB4Q15147 1175 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 DHCR24Q15392 516 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 ELAVL1Q15717 326 aaKnown RBP3.88□□□□□ -1.79
SMC6-202ENST00000381272 ATP13A4Q4VNC1 1196 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 BRDTQ58F21 947 aaPredicted RBP3.88□□□□□ -1.79
SMC6-202ENST00000381272 TNFAIP8L3Q5GJ75 292 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 FKBP1CQ5VVH2 108 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 KAZNQ674X7 775 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 SNRNP48Q6IEG0 339 aaKnown RBP3.88□□□□□ -1.79
SMC6-202ENST00000381272 CYB5D1Q6P9G0 228 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 RHBDF2Q6PJF5 856 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 VSTM1Q6UX27 236 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 C15orf39Q6ZRI6 1047 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 TRMT10CQ7L0Y3 403 aaKnown RBP3.88□□□□□ -1.79
SMC6-202ENST00000381272 FAM228AQ86W67 206 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 CXorf67Q86X51 503 aaPredicted RBP3.88□□□□□ -1.79
SMC6-202ENST00000381272 CCDC60Q8IWA6 550 aaPredicted RBP3.88□□□□□ -1.79
SMC6-202ENST00000381272 UNC5BQ8IZJ1 945 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 SAMD3Q8N6K7 520 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 DYDC1Q8WWB3 177 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 GAB3Q8WWW8 586 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 RSAD2Q8WXG1 361 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 LPAR1Q92633 364 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 ARHGEF2Q92974 986 aaKnown RBP3.88□□□□□ -1.79
SMC6-202ENST00000381272 SNF8Q96H20 258 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 ZBED3Q96IU2 234 aaPredicted RBP3.88□□□□□ -1.79
SMC6-202ENST00000381272 IFT74Q96LB3 600 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 C9orf72Q96LT7 481 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 RUNDC3BQ96NL0 473 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 C11orf70Q9BRQ4 267 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 NTPCRQ9BSD7 190 aaKnown RBP3.88□□□□□ -1.79
SMC6-202ENST00000381272 TMEM109Q9BVC6 243 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 ROPN1BQ9BZX4 212 aaPredicted RBP3.88□□□□□ -1.79
SMC6-202ENST00000381272 POLR3FQ9H1D9 316 aaPredicted RBP3.88□□□□□ -1.79
SMC6-202ENST00000381272 ROPN1Q9HAT0 212 aaPredicted RBP3.88□□□□□ -1.79
SMC6-202ENST00000381272 APOBEC3GQ9HC16 384 aaKnown RBP3.88□□□□□ -1.79
SMC6-202ENST00000381272 C1orf112Q9NSG2 853 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 ABCF3Q9NUQ8 709 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 FGFR1OP2Q9NVK5 253 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 NINJ2Q9NZG7 142 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 HS3ST3A1Q9Y663 406 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 PARP14Q460N5 1801 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 TMEM120BA0PK00 339 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 PRSS38A1L453 326 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 LCHNA4D1U4 455 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 LRRIQ4A6NIV6 560 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 NPIPB8E9PQR5 432 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 NRP1O14786 923 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 THAP12O43422 761 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 EXTL3O43909 919 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 KDM1AO60341 852 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 PEX14O75381 377 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 ALDH1A2O94788 518 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 PROSCO94903 275 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 TTC4O95801 387 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 EDN1P05305 212 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 C1SP09871 688 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 ZSCAN5DPP0CG00 497 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 GHRP10912 638 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 KRT10P13645 584 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 TCF4P15884 667 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 KCNA2P16389 499 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 HSD3B2P26439 372 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 ACTR2P61160 394 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 ELF3P78545 371 aaPredicted RBP3.88□□□□□ -1.79
SMC6-202ENST00000381272 SP2Q02086 613 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 GCNT1Q02742 428 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 CD69Q07108 199 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 FSTL1Q12841 308 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 XRCC4Q13426 336 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 MAMLD1Q13495 774 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 SPIDRQ14159 915 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 ITIH4Q14624 930 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 PSMD6Q15008 389 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 E2F5Q15329 346 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 SNCBQ16143 134 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 LSM12Q3MHD2 195 aaKnown RBP3.88□□□□□ -1.79
SMC6-202ENST00000381272 IZUMO3Q5VZ72 239 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 TMEM270Q6UE05 265 aa3.88□□□□□ -1.79
SMC6-202ENST00000381272 CRELD2Q6UXH1 353 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms