RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 ADRA1BP35368 520 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 ADARP55265 1226 aaKnown RBP12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 JAG1P78504 1218 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 LRRC74AQ0VAA2 488 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 MPP2Q14168 576 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 LIN52Q52LA3 116 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 ARPINQ7Z6K5 226 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 TMCO5AQ8N6Q1 288 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 METTL6Q8TCB7 284 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 COMMD8Q9NX08 183 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 LNPEPQ9UIQ6 1025 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 KAT6AQ92794 2004 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 ADM5C9JUS6 153 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 VCLP18206 1134 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 LBPP18428 481 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 IL1R2P27930 398 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 OR1E1P30953 314 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 DDX39BQ13838 428 aaKnown RBP12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 SQLEQ14534 574 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 PFKFB4Q16877 469 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 EML3Q32P44 896 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 RBM44Q6ZP01 1051 aaKnown RBP12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 SLC26A9Q7LBE3 791 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 AMIGO2Q86SJ2 522 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 MYO1HQ8N1T3 1032 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 C7orf43Q8WVR3 580 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 NDNQ99608 321 aa12.89□□□□□ -0.35
DNMT3A-204ENST00000380756 CCDC154A6NI56 674 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 CLDN5O00501 218 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 MFSD11O43934 449 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 ENDOD1O94919 500 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 HK2P52789 917 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 MRPS15P82914 257 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 SLC39A4Q6P5W5 647 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 DDX1Q92499 740 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 VPS33AQ96AX1 596 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 CCDC28BQ9BUN5 200 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 RCOR3Q9P2K3 495 aaPredicted RBP12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 TCRBV7S3A2A0A539 114 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 CYBBP04839 570 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 CSH1P0DML2 217 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 CSH2P0DML3 217 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 CLCN5P51795 746 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 CTXN3Q4LDR2 81 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 AMIGO3Q86WK7 504 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 DGCR14Q96DF8 476 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 QKIQ96PU8 341 aaKnown RBP eCLIP12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 ACOX2Q99424 681 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 GPR88Q9GZN0 384 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 GCATO75600 419 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 TSPAN8P19075 237 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 ICAM3P32942 547 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 ILF2Q12905 390 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 KRT33BQ14525 404 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 MFSD10Q14728 455 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 PPP1R13LQ8WUF5 828 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 FAM120BQ96EK7 910 aaKnown RBP12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 LENG8Q96PV6 779 aaPredicted RBP12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 FBXO44Q9H4M3 255 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 FAM50BQ9Y247 325 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 FARP1Q9Y4F1 1045 aaPredicted RBP12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 CBX4O00257 560 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 FGF10O15520 208 aaPredicted RBP12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 SLC2A4P14672 509 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 VAV1P15498 845 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 VAC14Q08AM6 782 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 LBX2Q6XYB7 198 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 DNAJC14Q6Y2X3 702 aaPredicted RBP12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 PTGR2Q8N8N7 351 aaPredicted RBP12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 LZICQ8WZA0 190 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 KLRG1Q96E93 195 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 CAMKK2Q96RR4 588 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 TMEM216Q9P0N5 145 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 NKX1-2Q9UD57 310 aaPredicted RBP12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 ATP11BQ9Y2G3 1177 aa12.88□□□□□ -0.35
DNMT3A-204ENST00000380756 C5P01031 1676 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 C1orf232A0A0U1RR37 186 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 PDHXO00330 501 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 KRT8P05787 483 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 NEK3P51956 506 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 GPX6P59796 221 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 CDH18Q13634 790 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 POLD3Q15054 466 aaPredicted RBP12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 SH3PXD2AQ5TCZ1 1133 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 POTEHQ6S545 545 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 RRM2BQ7LG56 351 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 OR56A4Q8NGH8 313 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 DCAKDQ8WVC6 231 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 FIG4Q92562 907 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 C18orf25Q96B23 403 aaPredicted RBP12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 SH3KBP1Q96B97 665 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 ADGRE3Q9BY15 652 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 DUSP16Q9BY84 665 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 ACTR8Q9H981 624 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 SCUBE2Q9NQ36 999 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 TMEM161AQ9NX61 479 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 IMPAD1Q9NX62 359 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 GOLGA4Q13439 2230 aaKnown RBP12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 BTN3A1O00481 513 aa12.87□□□□□ -0.35
DNMT3A-204ENST00000380756 PRRG1O14668 218 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms