RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 CA9Q16790 459 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 HNRNPA1L2Q32P51 320 aaKnown RBP9.45□□□□□ -0.9
HMGN1-202ENST00000380747 MAP7D1Q3KQU3 841 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 PLK5Q496M5 336 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 PPP6R3Q5H9R7 873 aaPredicted RBP9.45□□□□□ -0.9
HMGN1-202ENST00000380747 KCNT1Q5JUK3 1230 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 ARTNQ5T4W7 220 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 ERMARDQ5T6L9 678 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 STPG1Q5TH74 334 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 LINGO4Q6UY18 593 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 SLC36A4Q6YBV0 504 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 ZNF783Q6ZMS7 281 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 ZNF354CQ86Y25 554 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 RTL3Q8N8U3 475 aaKnown RBP9.45□□□□□ -0.9
HMGN1-202ENST00000380747 C12orf50Q8NA57 414 aaPredicted RBP9.45□□□□□ -0.9
HMGN1-202ENST00000380747 DCAF4L2Q8NA75 395 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 KDF1Q8NAX2 398 aaPredicted RBP9.45□□□□□ -0.9
HMGN1-202ENST00000380747 KDM1BQ8NB78 822 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 SPC24Q8NBT2 197 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 PSMB7Q99436 277 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 MKRN2Q9H000 416 aaKnown RBP9.45□□□□□ -0.9
HMGN1-202ENST00000380747 DUSP15Q9H1R2 295 aaPredicted RBP9.45□□□□□ -0.9
HMGN1-202ENST00000380747 CATSPERBQ9H7T0 1116 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 ZWILCHQ9H900 591 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 CD93Q9NPY3 652 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 NDFIP2Q9NV92 336 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 TMEM248Q9NWD8 314 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 UVRAGQ9P2Y5 699 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 ZNF212Q9UDV6 495 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 RALYQ9UKM9 306 aaKnown RBP9.45□□□□□ -0.9
HMGN1-202ENST00000380747 NEU3Q9UQ49 428 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 SPAG17Q6Q759 2223 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 LOC400499M0QZD8 3231 aa9.45□□□□□ -0.9
HMGN1-202ENST00000380747 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 TARSL2A2RTX5 802 aaKnown RBP9.44□□□□□ -0.9
HMGN1-202ENST00000380747 FGF10O15520 208 aaPredicted RBP9.44□□□□□ -0.9
HMGN1-202ENST00000380747 RAMP2O60895 175 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 NDUFS2O75306 463 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 PROSCO94903 275 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 KCNK5O95279 499 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 DNTTP04053 509 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 VAV1P15498 845 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 TCF4P15884 667 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 GLDCP23378 1020 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 IL1R2P27930 398 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 PCK1P35558 622 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 GJC1P36383 396 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 ACVRL1P37023 503 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 ETFBP38117 255 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 MAGEA1P43355 309 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 DHPSP49366 369 aaPredicted RBP9.44□□□□□ -0.9
HMGN1-202ENST00000380747 RPL6Q02878 288 aaKnown RBP9.44□□□□□ -0.9
HMGN1-202ENST00000380747 SEMA3BQ13214 749 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 POLD3Q15054 466 aaPredicted RBP9.44□□□□□ -0.9
HMGN1-202ENST00000380747 SF3A2Q15428 464 aaKnown RBP9.44□□□□□ -0.9
HMGN1-202ENST00000380747 DLG2Q15700 870 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 HADHQ16836 314 aaKnown RBP9.44□□□□□ -0.9
HMGN1-202ENST00000380747 SMTNL2Q2TAL5 461 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 BOLA3Q53S33 107 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 C9orf64Q5T6V5 341 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 ZNF776Q68DI1 518 aaPredicted RBP9.44□□□□□ -0.9
HMGN1-202ENST00000380747 RETSATQ6NUM9 610 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 ARMCX6Q7L4S7 300 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 LPCAT2Q7L5N7 544 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 FAM124AQ86V42 546 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 NLRP14Q86W24 1093 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 MMAAQ8IVH4 418 aaKnown RBP9.44□□□□□ -0.9
HMGN1-202ENST00000380747 TMEFF1Q8IYR6 380 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 STK40Q8N2I9 435 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 SH2D3CQ8N5H7 860 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 DEFB119Q8N690 84 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 NIPA2Q8N8Q9 360 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 ZNF511Q8NB15 262 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 ATP11CQ8NB49 1132 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 GANCQ8TET4 914 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 HSPH1Q92598 858 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 FOXJ1Q92949 421 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 ARHGEF2Q92974 986 aaKnown RBP9.44□□□□□ -0.9
HMGN1-202ENST00000380747 ZC3H10Q96K80 434 aaKnown RBP9.44□□□□□ -0.9
HMGN1-202ENST00000380747 PANX2Q96RD6 677 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 KCTD15Q96SI1 283 aaPredicted RBP9.44□□□□□ -0.9
HMGN1-202ENST00000380747 ARRDC1-AS1Q9H2J1 176 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 RETREG1Q9H6L5 497 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 FBRSQ9HAH7 460 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 OSGEPQ9NPF4 335 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 ITM2CQ9NQX7 267 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.44□□□□□ -0.9
HMGN1-202ENST00000380747 MBD1Q9UIS9 605 aaPredicted RBP9.44□□□□□ -0.9
HMGN1-202ENST00000380747 PCDHB9Q9Y5E1 797 aa9.44□□□□□ -0.9
HMGN1-202ENST00000380747 SETXQ7Z333 2677 aaKnown RBP9.43□□□□□ -0.9
HMGN1-202ENST00000380747 MUC22E2RYF6 1773 aaPredicted RBP9.43□□□□□ -0.9
HMGN1-202ENST00000380747 IGHV1OR15-9A0A0B4J2B8 117 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 TMEM8BA6NDV4 472 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 SOWAHDA6NJG2 315 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 EIF3CLB5ME19 914 aaKnown RBP9.43□□□□□ -0.9
HMGN1-202ENST00000380747 H3BRJ5 948 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 K7ERQ8 282 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 SMAD6O43541 496 aaKnown RBP9.43□□□□□ -0.9
HMGN1-202ENST00000380747 ATP9BO43861 1147 aa9.43□□□□□ -0.9
HMGN1-202ENST00000380747 MT-CO1P00395 513 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms