RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 FRMD8P1Q9BZ68 369 aaPredicted RBP12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 EBF1Q9UH73 591 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 GJD2Q9UKL4 321 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 A0A0A0MRY4 1105 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 NEMP2A6NFY4 417 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 GLRA3O75311 464 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 ITGAXP20702 1163 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 HOXD11P31277 338 aaPredicted RBP12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 CXCR3P49682 368 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 BCAP31P51572 246 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 NME5P56597 212 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 CTBP1Q13363 440 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 APOFQ13790 326 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 RWDD4Q6NW29 188 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 PCDH20Q8N6Y1 951 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 SLC35F5Q8WV83 523 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 ARNTL2Q8WYA1 636 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 CLIP3Q96DZ5 547 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 VPS50Q96JG6 964 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 SPATA13Q96N96 652 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 GPATCH1Q9BRR8 931 aaKnown RBP12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 THEGQ9P2T0 379 aa12.67□□□□□ -0.38
PRPF40B-202ENST00000380281 C9JVG2 144 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 SOCS7O14512 581 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 SNNO75324 88 aaPredicted RBP12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 JCHAINP01591 159 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 POLBP06746 335 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 COX4I1P13073 169 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 TKTP29401 623 aaKnown RBP12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 GABRB2P47870 512 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 CDH15P55291 814 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 WASHC5Q12768 1159 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 POU6F1Q14863 301 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 SMUG1Q53HV7 270 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 XKR5Q6UX68 686 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 RIOX2Q8IUF8 465 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 AHI1Q8N157 1196 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 PQLC1Q8N2U9 271 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 TDRD5Q8NAT2 981 aaKnown RBP12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 TSPAN14Q8NG11 270 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 RNF139Q8WU17 664 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 EXT2Q93063 718 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 CERS2Q96G23 380 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 RHOBTB2Q9BYZ6 727 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 ZNF696Q9H7X3 374 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 CAAP1Q9H8G2 361 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 LRRC4Q9HBW1 653 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 TBC1D23Q9NUY8 699 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 ADA2Q9NZK5 511 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 SF3B1O75533 1304 aaKnown RBP eCLIP12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 H3BRB1 525 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 CCNT2O60583 730 aaKnown RBP12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 TSPAN1O60635 241 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 RECQL4O94761 1208 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 ZBTB11O95625 1053 aaPredicted RBP12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 RCVRNP35243 200 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 DMPKQ09013 629 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 TTLL4Q14679 1199 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 PRAMEF19Q5SWL8 479 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 FAM91A1Q658Y4 838 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 DCDC5Q6ZRR9 648 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 CENPSQ8N2Z9 138 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 SPATA22Q8NHS9 363 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 RCN3Q96D15 328 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 KCNK16Q96T55 309 aa12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 PIN4Q9Y237 131 aaKnown RBP12.66□□□□□ -0.38
PRPF40B-202ENST00000380281 J3QRK9 145 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 EEF2KO00418 725 aaKnown RBP12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 ZBTB24O43167 697 aaPredicted RBP12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 PIGNO95427 931 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 C2P06681 752 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 TGFB3P10600 412 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 HNRNPLP14866 589 aaKnown RBP eCLIP12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 SERPINB9P50453 376 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 METTL21CQ5VZV1 264 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 OTOP3Q7RTS5 596 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 CXorf38Q8TB03 319 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 DDI1Q8WTU0 396 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 KCTD4Q8WVF5 259 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 FBXL8Q96CD0 374 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 LRGUKQ96M69 825 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 NPAS2Q99743 824 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 ZNF670Q9BS34 389 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 NDEL1Q9GZM8 345 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 CYP3A43Q9HB55 503 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 MOCS1Q9NZB8 636 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 CROTQ9UKG9 612 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 TMA7Q9Y2S6 64 aaKnown RBP12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 CCL22O00626 93 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 KLF11O14901 512 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 MX2P20592 715 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 SEPT6Q14141 434 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 USP10Q14694 798 aaKnown RBP12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 CYP2R1Q6VVX0 501 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 ARMCX2Q7L311 632 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 CLVS1Q8IUQ0 354 aaPredicted RBP12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 ZFP42Q96MM3 310 aa12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 GATA5Q9BWX5 397 aaPredicted RBP12.65□□□□□ -0.38
PRPF40B-202ENST00000380281 C1orf21Q9H246 121 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms