RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 FGBP02675 491 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 LINC00271P0C7V0 271 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 IRF1P10914 325 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 NMBRP28336 390 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 NUMBP49757 651 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 ITKQ08881 620 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 FRG1Q14331 258 aaKnown RBP20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 KDELC2Q7Z4H8 507 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 FIBCD1Q8N539 461 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 TEX26Q8N6G2 289 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 NSMCE1Q8WV22 266 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 WBP2Q969T9 261 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 AZIN2Q96A70 460 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 IMP4Q96G21 291 aaKnown RBP20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 FSD1LQ9BXM9 530 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 ZBP1Q9H171 429 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 RXFP1Q9HBX9 757 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 UXTQ9UBK9 157 aaPredicted RBP20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 DOCK6Q96HP0 2047 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 CNPP09543 421 aaKnown RBP20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 RPS24P62847 133 aaKnown RBP20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 HTRA4P83105 476 aaPredicted RBP20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 IFT88Q13099 833 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 MPP3Q13368 585 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 RANBP10Q6VN20 620 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 TIFABQ6ZNK6 161 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 CDHR3Q6ZTQ4 885 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 GPR65Q8IYL9 337 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 CCDC197Q8NCU1 140 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 SPOCK2Q92563 424 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 ZNF778Q96MU6 729 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 CYP2S1Q96SQ9 504 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 KIFC1Q9BW19 673 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 ATXN3LQ9H3M9 355 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 ZNF334Q9HCZ1 680 aaPredicted RBP20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 MAFFQ9ULX9 164 aa20.17■□□□□ 0.82
PDLIM5-205ENST00000380180 MTCL1Q9Y4B5 1905 aaKnown RBP20.16■□□□□ 0.82
PDLIM5-205ENST00000380180 A0A0D9SEW6 157 aa20.16■□□□□ 0.82
PDLIM5-205ENST00000380180 SNX3O60493 162 aa20.16■□□□□ 0.82
PDLIM5-205ENST00000380180 CTSAP10619 480 aa20.16■□□□□ 0.82
PDLIM5-205ENST00000380180 ETV4P43268 484 aa20.16■□□□□ 0.82
PDLIM5-205ENST00000380180 DNAJC3Q13217 504 aa20.16■□□□□ 0.82
PDLIM5-205ENST00000380180 PCSK7Q16549 785 aa20.16■□□□□ 0.82
PDLIM5-205ENST00000380180 PCID2Q5JVF3 399 aa20.16■□□□□ 0.82
PDLIM5-205ENST00000380180 RGS9BPQ6ZS82 235 aa20.16■□□□□ 0.82
PDLIM5-205ENST00000380180 FAM111AQ96PZ2 611 aa20.16■□□□□ 0.82
PDLIM5-205ENST00000380180 SRPK1Q96SB4 655 aaKnown RBP20.16■□□□□ 0.82
PDLIM5-205ENST00000380180 SLC13A1Q9BZW2 595 aa20.16■□□□□ 0.82
PDLIM5-205ENST00000380180 AGO1Q9UL18 857 aaKnown RBP20.16■□□□□ 0.82
PDLIM5-205ENST00000380180 WDR91A4D1P6 747 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 ANKRD65E5RJM6 399 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 H3BNC9 293 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 F11P03951 625 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 ETFBP38117 255 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 CCNFP41002 786 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 CDH4P55283 916 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 WNT3AP56704 352 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 C1QTNF8P60827 252 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 TNK2Q07912 1038 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 POU6F1Q14863 301 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 RABGAP1LQ5R372 815 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 KDELC1Q6UW63 502 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 FAM47EQ6ZV65 393 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 KLHL23Q8NBE8 558 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 OR52K2Q8NGK3 314 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 LRRC8CQ8TDW0 803 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 PRICKLE1Q96MT3 831 aaPredicted RBP20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 AGAP2Q99490 1192 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 ZBED2Q9BTP6 218 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 PITPNM3Q9BZ71 974 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 RETREG1Q9H6L5 497 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 TXNDC16Q9P2K2 825 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 TTC24A2A3L6 582 aaPredicted RBP20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 CCDC78A2IDD5 438 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 TGM5O43548 720 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 PRAMEF11O60813 436 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 DHRS4L1P0CG22 281 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 CD86P42081 329 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 SGSHP51688 502 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 DSC2Q02487 901 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 LBRQ14739 615 aaKnown RBP20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 HSP90AA5PQ58FG0 334 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 ADGRF1Q5T601 910 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 TEDDM1Q5T9Z0 273 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 PKN3Q6P5Z2 889 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 SRLQ86TD4 932 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 ITIH5Q86UX2 942 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 KCNMB4Q86W47 210 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 NDUFAF2Q8N183 169 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 PGBD5Q8N414 524 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 ZNF75CPQ92670 426 aaPredicted RBP20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 BADQ92934 168 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 SLC22A12Q96S37 553 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 CPNE1Q99829 537 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 IQCGQ9H095 443 aaKnown RBP20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 VPS11Q9H270 941 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 C20orf96Q9NUD7 363 aaPredicted RBP20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 SMPD4Q9NXE4 827 aa20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 CXXC1Q9P0U4 656 aaPredicted RBP20.15■□□□□ 0.82
PDLIM5-205ENST00000380180 STK39Q9UEW8 545 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 376.4 ms