RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 ITM2CQ9NQX7 267 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 IPO11Q9UI26 975 aaKnown RBP13.49□□□□□ -0.25
CKAP2-202ENST00000378034 MFHAS1Q9Y4C4 1052 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 EML5Q05BV3 1969 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 ZSCAN12O43309 604 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 RPP40O75818 363 aaKnown RBP13.49□□□□□ -0.25
CKAP2-202ENST00000378034 GSRP00390 522 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 DNTTP04053 509 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 MX2P20592 715 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 P2RY2P41231 377 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 CDKN2BP42772 138 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 PEX5P50542 639 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 RWDD2BP57060 319 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 CARD16Q5EG05 197 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 TFDP3Q5H9I0 405 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 MFSD7Q6UXD7 560 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 KIAA1324Q6UXG2 1013 aaKnown RBP13.49□□□□□ -0.25
CKAP2-202ENST00000378034 Q6ZVU0 165 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 STK40Q8N2I9 435 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 OR2A12Q8NGT7 310 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 KRT35Q92764 455 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 ALS2CR12Q96Q35 445 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 KCNF1Q9H3M0 494 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 LZTFL1Q9NQ48 299 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 USP36Q9P275 1121 aaKnown RBP13.49□□□□□ -0.25
CKAP2-202ENST00000378034 EFR3BQ9Y2G0 817 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 CAPN6Q9Y6Q1 641 aa13.49□□□□□ -0.25
CKAP2-202ENST00000378034 J3KR12 359 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 APOL1O14791 398 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 HRO43593 1189 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 MFSD11O43934 449 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 ZNF821O75541 412 aaPredicted RBP13.48□□□□□ -0.25
CKAP2-202ENST00000378034 TMCC1O94876 653 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 ADH1BP00325 375 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 IGLV3-19P01714 112 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 VAV1P15498 845 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 OXTRP30559 389 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 CETN2P41208 172 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 SNRPD1P62314 119 aaKnown RBP13.48□□□□□ -0.25
CKAP2-202ENST00000378034 GALNT2Q10471 571 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 PPP2R5EQ16537 467 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 MAP7D1Q3KQU3 841 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 TTC31Q49AM3 519 aaPredicted RBP13.48□□□□□ -0.25
CKAP2-202ENST00000378034 FAM46CQ5VWP2 391 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 RFX6Q8HWS3 928 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 ATPAF2Q8N5M1 289 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 FATE1Q969F0 183 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 ERLEC1Q96DZ1 483 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 ZNF830Q96NB3 372 aaPredicted RBP13.48□□□□□ -0.25
CKAP2-202ENST00000378034 EPC1Q9H2F5 836 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 FCF1Q9Y324 198 aaKnown RBP13.48□□□□□ -0.25
CKAP2-202ENST00000378034 R4GN57 208 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 MUC6Q6W4X9 2439 aa13.48□□□□□ -0.25
CKAP2-202ENST00000378034 PROB1E7EW31 1015 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 C1QTNF3-AMACRE9PGA6 284 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 PRNPP04156 253 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 C5AR1P21730 350 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 PTPN7P35236 360 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 MARCKSL1P49006 195 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 NHLH1Q02575 133 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 CST6Q15828 149 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 TIGD7Q6NT04 549 aaPredicted RBP13.47□□□□□ -0.25
CKAP2-202ENST00000378034 SLC36A4Q6YBV0 504 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 USP30Q70CQ3 517 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 BZW1Q7L1Q6 419 aaKnown RBP13.47□□□□□ -0.25
CKAP2-202ENST00000378034 CCDC50Q8IVM0 306 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 PLD5Q8N7P1 536 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 TMIEQ8NEW7 156 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 NSMCE1Q8WV22 266 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 HES6Q96HZ4 224 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 LRIG1Q96JA1 1093 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 TSGA13Q96PP4 275 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 SLC6A17Q9H1V8 727 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 PABPC3Q9H361 631 aaKnown RBP13.47□□□□□ -0.25
CKAP2-202ENST00000378034 PPM1HQ9ULR3 514 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 CACNA1HO95180 2353 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 hCG_1818297A0A087WSY0 165 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 MAFKO60675 156 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 CHRNA3P32297 505 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 SLC8A1P32418 973 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 GARSP41250 739 aaKnown RBP13.47□□□□□ -0.25
CKAP2-202ENST00000378034 NR2C2P49116 596 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 TPMTP51580 245 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 ZNF33AQ06730 810 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 CYTH1Q15438 398 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 LEKR1Q6ZMV7 388 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 CEP68Q76N32 757 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 KBTBD6Q86V97 674 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 MMAAQ8IVH4 418 aaKnown RBP13.47□□□□□ -0.25
CKAP2-202ENST00000378034 TP53INP2Q8IXH6 220 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 TRIM58Q8NG06 486 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 OR2AP1Q8NGE2 309 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 ZC3H10Q96K80 434 aaKnown RBP13.47□□□□□ -0.25
CKAP2-202ENST00000378034 GDAP1L1Q96MZ0 367 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 HEPHQ9BQS7 1158 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 BRD8Q9H0E9 1235 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 TNKS2Q9H2K2 1166 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 DTLQ9NZJ0 730 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 NCKAP1Q9Y2A7 1128 aa13.47□□□□□ -0.25
CKAP2-202ENST00000378034 ACTL7AQ9Y615 435 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms