RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 TMEM247A6NEH6 219 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 BMP10O95393 424 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 CAPNS1P04632 268 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 HNRNPLP14866 589 aaKnown RBP eCLIP16.11■□□□□ 0.17
CKAP4-201ENST00000378026 BCAP31P51572 246 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 TUBA4AP68366 448 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 CBLBQ13191 982 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 AGKQ53H12 422 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 RPS27LQ71UM5 84 aaKnown RBP16.11■□□□□ 0.17
CKAP4-201ENST00000378026 TBC1D15Q8TC07 691 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 P2RY11Q96G91 374 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 TLK1Q9UKI8 766 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 NRXN2Q9P2S2 1712 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 ARID2Q68CP9 1835 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 RNF103-CHMP3A0A140T963 221 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 HEATR9A2RTY3 570 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 TADA2AO75478 443 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 ZNF182P17025 639 aaPredicted RBP16.11■□□□□ 0.17
CKAP4-201ENST00000378026 GABRB3P28472 473 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 TMED10P49755 219 aaKnown RBP16.11■□□□□ 0.17
CKAP4-201ENST00000378026 ITGADQ13349 1161 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 NHSL2Q5HYW2 709 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 NCBP2-AS2Q69YL0 99 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 IL31Q6EBC2 164 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 C4orf22Q6V702 233 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 HM13Q8TCT9 377 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 CORO1BQ9BR76 489 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 BCO2Q9BYV7 579 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 TSPYL2Q9H2G4 693 aaPredicted RBP16.11■□□□□ 0.17
CKAP4-201ENST00000378026 SOX17Q9H6I2 414 aaPredicted RBP16.11■□□□□ 0.17
CKAP4-201ENST00000378026 HESX1Q9UBX0 185 aa16.11■□□□□ 0.17
CKAP4-201ENST00000378026 VDRP11473 427 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 EIF2B2P49770 351 aaKnown RBP16.1■□□□□ 0.17
CKAP4-201ENST00000378026 CLCN2P51788 898 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 PRKAA1Q13131 559 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 ZNF829Q3KNS6 432 aaPredicted RBP16.1■□□□□ 0.17
CKAP4-201ENST00000378026 LIPMQ5VYY2 423 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 EGFLAMQ63HQ2 1017 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 TMEM53Q6P2H8 277 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 CPSF7Q8N684 471 aaKnown RBP16.1■□□□□ 0.17
CKAP4-201ENST00000378026 FBXL20Q96IG2 436 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 ANKRD60Q9BZ19 345 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 TRIP11Q15643 1979 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 MAFGO15525 162 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 MFSD11O43934 449 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 KPNA1P52294 538 aaPredicted RBP16.1■□□□□ 0.17
CKAP4-201ENST00000378026 IFRD2Q12894 506 aaPredicted RBP16.1■□□□□ 0.17
CKAP4-201ENST00000378026 FAM131BQ86XD5 332 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.1■□□□□ 0.17
CKAP4-201ENST00000378026 DCPSQ96C86 337 aaKnown RBP16.1■□□□□ 0.17
CKAP4-201ENST00000378026 TSNARE1Q96NA8 513 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 RPF1Q9H9Y2 349 aaKnown RBP16.1■□□□□ 0.17
CKAP4-201ENST00000378026 GBA2Q9HCG7 927 aaPredicted RBP16.1■□□□□ 0.17
CKAP4-201ENST00000378026 PPP1R1BQ9UD71 204 aaPredicted RBP16.1■□□□□ 0.17
CKAP4-201ENST00000378026 CORINQ9Y5Q5 1042 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 KIAA1217Q5T5P2 1943 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 C1orf232A0A0U1RR37 186 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 GRM3Q14832 879 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 RAB39AQ14964 217 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 NR1D2Q14995 579 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 CYP2A13Q16696 494 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 LDLRAP1Q5SW96 308 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 CERCAMQ5T4B2 595 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 JADE1Q6IE81 842 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 MAMDC4Q6UXC1 1216 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 LSMEM2Q8N112 164 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 CNTD1Q8N815 330 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 TFAP2CQ92754 450 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 NPLQ9BXD5 320 aaPredicted RBP16.1■□□□□ 0.17
CKAP4-201ENST00000378026 ZNF385DQ9H6B1 395 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 MAFBQ9Y5Q3 323 aaPredicted RBP16.1■□□□□ 0.17
CKAP4-201ENST00000378026 WDR81Q562E7 1941 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 LRRC37AA6NMS7 1700 aa16.1■□□□□ 0.17
CKAP4-201ENST00000378026 VWA5AO00534 786 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 PFKMP08237 780 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 MLNP12872 115 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 BMXP51813 675 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 NME5P56597 212 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 FKBP1AP62942 108 aaKnown RBP16.09■□□□□ 0.17
CKAP4-201ENST00000378026 GHRHRQ02643 423 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 USP10Q14694 798 aaKnown RBP16.09■□□□□ 0.17
CKAP4-201ENST00000378026 PPP1R3AQ16821 1122 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 CCDC92Q53HC0 331 aaPredicted RBP16.09■□□□□ 0.17
CKAP4-201ENST00000378026 PPP1R26Q5T8A7 1209 aaPredicted RBP16.09■□□□□ 0.17
CKAP4-201ENST00000378026 OLFML1Q6UWY5 402 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 SLC15A3Q8IY34 581 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 C7orf31Q8N865 590 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 OR9I1Q8NGQ6 314 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 VPS39Q96JC1 886 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 NEURL2Q9BR09 285 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 RBMX2Q9Y388 322 aaKnown RBP16.09■□□□□ 0.17
CKAP4-201ENST00000378026 HTR3EA5X5Y0 456 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 LACTBL1A8MY62 500 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 C8BP07358 591 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 SBK3P0C264 359 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 CDH3P22223 829 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 LAMTOR4Q0VGL1 99 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 SURF1Q15526 300 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 TRIM50Q86XT4 487 aa16.09■□□□□ 0.17
CKAP4-201ENST00000378026 KHSRPQ92945 711 aaKnown RBP eCLIP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms