RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 C6orf10Q5SRN2 563 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 NEPROQ6NW34 567 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 ARMCX6Q7L4S7 300 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 KCNMB4Q86W47 210 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 C3orf58Q8NDZ4 430 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 HMCESQ96FZ2 354 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 MED8Q96G25 268 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 SAMD11Q96NU1 681 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 FOXP3Q9BZS1 431 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 ZCCHC2Q9C0B9 1178 aaKnown RBP8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 HSD3B7Q9H2F3 369 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 CNOT10Q9H9A5 744 aaKnown RBP8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 ETNK2Q9NVF9 386 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 HCFC1R1Q9NWW0 138 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 PNMA8BQ9ULN7 279 aaPredicted RBP8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 RNF112Q9ULX5 631 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 RUVBL2Q9Y230 463 aaKnown RBP8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 HACD1B0YJ81 288 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 CCL22O00626 93 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 MT-CO1P00395 513 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 PRKCGP05129 697 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 RB1P06400 928 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 SOX11P35716 441 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 JAM2P57087 298 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 DSC2Q02487 901 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 PDGFRLQ15198 375 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 CNGA3Q16281 694 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 AAK1Q2M2I8 961 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 UGT3A1Q6NUS8 523 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 FAM151BQ6UXP7 276 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 LRRTM3Q86VH5 581 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 DEFB119Q8N690 84 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 CCDC197Q8NCU1 140 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 HIPK4Q8NE63 616 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 SLC35F5Q8WV83 523 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 PHF21BQ96EK2 531 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 FAM96AQ9H5X1 160 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 SALL4Q9UJQ4 1053 aa8.59□□□□□ -1.03
CRNKL1-202ENST00000377340 MYH4Q9Y623 1939 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 PDE2AO00408 941 aaPredicted RBP8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 AVILO75366 819 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 CYP1A1P04798 512 aaPredicted RBP8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 CTSAP10619 480 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 PABPC1P11940 636 aaKnown RBP8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 MTHFRP42898 656 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 PLK1P53350 603 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 VITQ6UXI7 678 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 POLNQ7Z5Q5 900 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 IFNLR1Q8IU57 520 aaPredicted RBP8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 MMAAQ8IVH4 418 aaKnown RBP8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 ARHGAP24Q8N264 748 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 PRELID2Q8N945 189 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 RFWD2Q8NHY2 731 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 EPS8L3Q8TE67 593 aaKnown RBP8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 FEM1CQ96JP0 617 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 PTPRHQ9HD43 1115 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 NSMCE4AQ9NXX6 385 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 FBXW11Q9UKB1 542 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 PCDHGB4Q9UN71 923 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 R3HDM2Q9Y2K5 976 aaKnown RBP8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 ACOT9Q9Y305 439 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 MYO5AQ9Y4I1 1855 aaKnown RBP8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 TCRBV7S2A1N4TA0A589 114 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 TTC24A2A3L6 582 aaPredicted RBP8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 C2orf78A6NCI8 922 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 DNALI1O14645 258 aaPredicted RBP8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 BANF1O75531 89 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 MTA2O94776 668 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 TMCC1O94876 653 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 MT-CYBP00156 380 aaPredicted RBP8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 MYL2P10916 166 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 HLA-EP13747 358 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 TYRP14679 529 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 L1CAMP32004 1257 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 CSKP41240 450 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 HALP42357 657 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 MGAT5Q09328 741 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 FAM133BQ5BKY9 247 aaKnown RBP8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 ACAD11Q709F0 780 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 PLD5Q8N7P1 536 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 ABCG4Q9H172 646 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 NDOR1Q9UHB4 597 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 CD84Q9UIB8 345 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 HCFC2Q9Y5Z7 792 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 EVPLQ92817 2033 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 TTC4O95801 387 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 BAG2O95816 211 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 UNGP13051 313 aaPredicted RBP8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 AMD1P17707 334 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 PTPN9P43378 593 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 MAPK8P45983 427 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 RASSF2P50749 326 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 YBEYP58557 167 aaPredicted RBP8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 PITX1P78337 314 aaPredicted RBP8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 PLIN5Q00G26 463 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 CAPRIN1Q14444 709 aaKnown RBP8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 TMEM110Q86TL2 294 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 CREG2Q8IUH2 290 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 CCNJLQ8IV13 435 aa8.58□□□□□ -1.04
CRNKL1-202ENST00000377340 ZNF513Q8N8E2 541 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms