RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 TUSC3Q13454 348 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 FGD3Q5JSP0 725 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 DEFB107AQ8IZN7 70 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 MYCBPAPQ8TBZ2 947 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 DUSP16Q9BY84 665 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 TREHO43280 583 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 CYP1A2P05177 515 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 ZBTB48P10074 688 aaPredicted RBP13.8□□□□□ -0.2
GPC6-201ENST00000377047 RPA3P35244 121 aaPredicted RBP13.8□□□□□ -0.2
GPC6-201ENST00000377047 FAM98BQ52LJ0 330 aaKnown RBP13.8□□□□□ -0.2
GPC6-201ENST00000377047 LRRN4Q8WUT4 740 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 DEPDC7Q96QD5 511 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 EXO5Q9H790 373 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 THAP1Q9NVV9 213 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 ZNF510Q9Y2H8 683 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 PCDHA11Q9Y5I1 949 aa13.8□□□□□ -0.2
GPC6-201ENST00000377047 A0A0B4J269 797 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 FGF19O95750 216 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 IRF8Q02556 426 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 SPRYD7Q5W111 196 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 KYQ8NBH2 561 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 CAVIN3Q969G5 261 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 QRFPRQ96P65 431 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 FERD3LQ96RJ6 166 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 ROGDIQ9GZN7 287 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 PDE2AO00408 941 aaPredicted RBP13.79□□□□□ -0.2
GPC6-201ENST00000377047 CHADO15335 359 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 PIRTP0C851 137 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 TLX1P31314 330 aaPredicted RBP13.79□□□□□ -0.2
GPC6-201ENST00000377047 METTL3Q86U44 580 aaKnown RBP13.79□□□□□ -0.2
GPC6-201ENST00000377047 CROTQ9UKG9 612 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 ADAM28Q9UKQ2 775 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 SIK3Q9Y2K2 1263 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 ASTN2O75129 1339 aaPredicted RBP13.79□□□□□ -0.2
GPC6-201ENST00000377047 NQO1P15559 274 aaKnown RBP13.79□□□□□ -0.2
GPC6-201ENST00000377047 S100A3P33764 101 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 IL17AQ16552 155 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 FAM45BPQ6NSW5 357 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 ZCCHC9Q8N567 271 aaKnown RBP13.79□□□□□ -0.2
GPC6-201ENST00000377047 LRRC52Q8N7C0 313 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 FAM45AQ8TCE6 357 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 DNAJC19Q96DA6 116 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 AGO1Q9UL18 857 aaKnown RBP13.79□□□□□ -0.2
GPC6-201ENST00000377047 RIPK3Q9Y572 518 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 A0A1W2PQH9 124 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 GSAPA4D1B5 854 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 HS6ST1O60243 411 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 PEX10O60683 326 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 PRKAG1P54619 331 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 DEFA1P59665 94 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 DEFA3P59666 94 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 CFAP52Q8N1V2 620 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 CPA6Q8N4T0 437 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 SELENOMQ8WWX9 145 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 TNPO3Q9Y5L0 923 aaKnown RBP13.79□□□□□ -0.2
GPC6-201ENST00000377047 FTH1P02794 183 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 HSMCR30P0CW71 290 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 HOXB8P17481 243 aaPredicted RBP13.79□□□□□ -0.2
GPC6-201ENST00000377047 PRMT9Q6P2P2 845 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 ABHD15Q6UXT9 468 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 FAM71AQ8IYT1 594 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 NSMCE2Q96MF7 247 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 ADPRHL2Q9NX46 363 aa13.79□□□□□ -0.2
GPC6-201ENST00000377047 OR4Q2P0C623 313 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 SPATA31C1P0DKV0 1188 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 PSMC3P17980 439 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 ABRQ12979 859 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 IFNLR1Q8IU57 520 aaPredicted RBP13.78□□□□□ -0.2
GPC6-201ENST00000377047 EFCAB3Q8N7B9 438 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 OR10G6Q8NH81 332 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 STARD8Q92502 1023 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 RNF157Q96PX1 679 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 TBC1D3DA0A087WVF3 549 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 TBC1D3IA0A087WXS9 549 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 TBC1D3EA0A087X179 549 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 TBC1D3KA0A087X1G2 549 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 TBC1D3FA6NER0 549 aaPredicted RBP13.78□□□□□ -0.2
GPC6-201ENST00000377047 SAC3D1A6NKF1 404 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 TBC1D3LB9A6J9 549 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 KPNA5O15131 536 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 INPP4BO15327 924 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 TBC1D3HP0C7X1 549 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 TTPAP49638 278 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 TBC1D3GQ6DHY5 549 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 TBC1D3CQ6IPX1 549 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 C16orf46Q6P387 395 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 TMC3Q7Z5M5 1100 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 TBC1D3Q8IZP1 549 aaPredicted RBP13.78□□□□□ -0.2
GPC6-201ENST00000377047 RERGQ96A58 199 aaPredicted RBP13.78□□□□□ -0.2
GPC6-201ENST00000377047 LENG1Q96BZ8 264 aaPredicted RBP13.78□□□□□ -0.2
GPC6-201ENST00000377047 TSPAN18Q96SJ8 248 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 LIMD1Q9UGP4 676 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 PADI3Q9ULW8 664 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 N6AMT1Q9Y5N5 214 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 BAZ2BQ9UIF8 2168 aaKnown RBP13.78□□□□□ -0.2
GPC6-201ENST00000377047 SEPT4O43236 478 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 LTA4HP09960 611 aaKnown RBP13.78□□□□□ -0.2
GPC6-201ENST00000377047 CCDC166P0CW27 439 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 FCGR1AP12314 374 aa13.78□□□□□ -0.2
GPC6-201ENST00000377047 LYPLAL1Q5VWZ2 237 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms