RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 ARRDC3Q96B67 414 aa21.5■■□□□ 1.03
VSX1-201ENST00000376707 PPP1R16AQ96I34 528 aa21.5■■□□□ 1.03
VSX1-201ENST00000376707 IL36AQ9UHA7 158 aa21.5■■□□□ 1.03
VSX1-201ENST00000376707 CA5BQ9Y2D0 317 aa21.5■■□□□ 1.03
VSX1-201ENST00000376707 LGALS16A8MUM7 142 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 SLC31A1O15431 190 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 PRLRP16471 622 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 MMP8P22894 467 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 SDC4P31431 198 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 SERPINH1P50454 418 aaKnown RBP21.49■■□□□ 1.03
VSX1-201ENST00000376707 FMO1Q01740 532 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 GNA12Q03113 381 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 SLC20A2Q08357 652 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 DNAJC3Q13217 504 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 ARSIQ5FYB1 569 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 DPY19L3Q6ZPD9 716 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 ERN2Q76MJ5 926 aaKnown RBP21.49■■□□□ 1.03
VSX1-201ENST00000376707 PHLDB2Q86SQ0 1253 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 HORMAD1Q86X24 394 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 ANKRD20A12PQ8NF67 263 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 SLC30A5Q8TAD4 765 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 RXFP2Q8WXD0 754 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 KLK6Q92876 244 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 KLHDC7BQ96G42 594 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 MYOCQ99972 504 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 C11orf70Q9BRQ4 267 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 CEP44Q9C0F1 390 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 PPARGC1AQ9UBK2 798 aaKnown RBP21.49■■□□□ 1.03
VSX1-201ENST00000376707 ZNF212Q9UDV6 495 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 PKD1L2Q7Z442 2459 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 PLXNB3Q9ULL4 1909 aa21.49■■□□□ 1.03
VSX1-201ENST00000376707 FAM208BQ5VWN6 2430 aa21.48■■□□□ 1.03
VSX1-201ENST00000376707 TRABD2BA6NFA1 517 aa21.48■■□□□ 1.03
VSX1-201ENST00000376707 RFPL3O75679 317 aa21.48■■□□□ 1.03
VSX1-201ENST00000376707 PCDH8O95206 1070 aa21.48■■□□□ 1.03
VSX1-201ENST00000376707 C1SP09871 688 aa21.48■■□□□ 1.03
VSX1-201ENST00000376707 CDK4P11802 303 aa21.48■■□□□ 1.03
VSX1-201ENST00000376707 CHRNB2P17787 502 aa21.48■■□□□ 1.03
VSX1-201ENST00000376707 STAT1P42224 750 aa21.48■■□□□ 1.03
VSX1-201ENST00000376707 DNA2P51530 1060 aa21.48■■□□□ 1.03
VSX1-201ENST00000376707 NCAPHQ15003 741 aa21.48■■□□□ 1.03
VSX1-201ENST00000376707 C15orf59Q2T9L4 293 aaPredicted RBP21.48■■□□□ 1.03
VSX1-201ENST00000376707 ARTNQ5T4W7 220 aa21.48■■□□□ 1.03
VSX1-201ENST00000376707 SFMBT2Q5VUG0 894 aa21.48■■□□□ 1.03
VSX1-201ENST00000376707 TRIM72Q6ZMU5 477 aa21.48■■□□□ 1.03
VSX1-201ENST00000376707 APTXQ7Z2E3 356 aaKnown RBP21.48■■□□□ 1.03
VSX1-201ENST00000376707 TMPRSS12Q86WS5 348 aa21.48■■□□□ 1.03
VSX1-201ENST00000376707 PCMTD1Q96MG8 357 aaPredicted RBP21.48■■□□□ 1.03
VSX1-201ENST00000376707 HDAC8Q9BY41 377 aa21.48■■□□□ 1.03
VSX1-201ENST00000376707 HSD3B7Q9H2F3 369 aa21.48■■□□□ 1.03
VSX1-201ENST00000376707 OR12D3Q9UGF7 316 aa21.48■■□□□ 1.03
VSX1-201ENST00000376707 PTPRBP23467 1997 aa21.48■■□□□ 1.03
VSX1-201ENST00000376707 TP53BP1Q12888 1972 aaPredicted RBP21.48■■□□□ 1.03
VSX1-201ENST00000376707 COL5A1P20908 1838 aaPredicted RBP21.48■■□□□ 1.03
VSX1-201ENST00000376707 LEFTY1O75610 366 aa21.47■■□□□ 1.03
VSX1-201ENST00000376707 ZMPSTE24O75844 475 aa21.47■■□□□ 1.03
VSX1-201ENST00000376707 THEGLP0DJG4 465 aa21.47■■□□□ 1.03
VSX1-201ENST00000376707 AKT2P31751 481 aa21.47■■□□□ 1.03
VSX1-201ENST00000376707 ADRA1BP35368 520 aa21.47■■□□□ 1.03
VSX1-201ENST00000376707 ETFBP38117 255 aa21.47■■□□□ 1.03
VSX1-201ENST00000376707 SYCP1Q15431 976 aa21.47■■□□□ 1.03
VSX1-201ENST00000376707 ZNF284Q2VY69 593 aa21.47■■□□□ 1.03
VSX1-201ENST00000376707 CCDC14Q49A88 953 aa21.47■■□□□ 1.03
VSX1-201ENST00000376707 RAB6CQ53S08 254 aa21.47■■□□□ 1.03
VSX1-201ENST00000376707 RWDD4Q6NW29 188 aaKnown RBP21.47■■□□□ 1.03
VSX1-201ENST00000376707 PCDH20Q8N6Y1 951 aaKnown RBP21.47■■□□□ 1.03
VSX1-201ENST00000376707 PDCD7Q8N8D1 485 aaKnown RBP21.47■■□□□ 1.03
VSX1-201ENST00000376707 TMEM145Q8NBT3 493 aa21.47■■□□□ 1.03
VSX1-201ENST00000376707 RAB6CQ9H0N0 254 aa21.47■■□□□ 1.03
VSX1-201ENST00000376707 DKK4Q9UBT3 224 aa21.47■■□□□ 1.03
VSX1-201ENST00000376707 RAXQ9Y2V3 346 aa21.47■■□□□ 1.03
VSX1-201ENST00000376707 FREM2Q5SZK8 3169 aa21.46■■□□□ 1.03
VSX1-201ENST00000376707 DMXL2Q8TDJ6 3036 aa21.46■■□□□ 1.03
VSX1-201ENST00000376707 RNF103O00237 685 aa21.46■■□□□ 1.03
VSX1-201ENST00000376707 SDC3O75056 442 aa21.46■■□□□ 1.03
VSX1-201ENST00000376707 ZNF821O75541 412 aaPredicted RBP21.46■■□□□ 1.03
VSX1-201ENST00000376707 HNRNPA2B1P22626 353 aaKnown RBP21.46■■□□□ 1.03
VSX1-201ENST00000376707 HNF1BP35680 557 aa21.46■■□□□ 1.03
VSX1-201ENST00000376707 NSFP46459 744 aaKnown RBP21.46■■□□□ 1.03
VSX1-201ENST00000376707 ACADVLP49748 655 aa21.46■■□□□ 1.03
VSX1-201ENST00000376707 NEK3P51956 506 aa21.46■■□□□ 1.03
VSX1-201ENST00000376707 ARF5P84085 180 aa21.46■■□□□ 1.03
VSX1-201ENST00000376707 CYP4F3Q08477 520 aa21.46■■□□□ 1.03
VSX1-201ENST00000376707 CAMK2BQ13554 666 aa21.46■■□□□ 1.03
VSX1-201ENST00000376707 CARD16Q5EG05 197 aa21.46■■□□□ 1.03
VSX1-201ENST00000376707 KANSL1Q7Z3B3 1105 aa21.46■■□□□ 1.03
VSX1-201ENST00000376707 JOSD2Q8TAC2 188 aa21.46■■□□□ 1.03
VSX1-201ENST00000376707 ERGIC2Q96RQ1 377 aa21.46■■□□□ 1.03
VSX1-201ENST00000376707 HEPHQ9BQS7 1158 aa21.46■■□□□ 1.03
VSX1-201ENST00000376707 FZD3Q9NPG1 666 aa21.46■■□□□ 1.03
VSX1-201ENST00000376707 FCF1Q9Y324 198 aaKnown RBP21.46■■□□□ 1.03
VSX1-201ENST00000376707 GPSM3Q9Y4H4 160 aa21.46■■□□□ 1.03
VSX1-201ENST00000376707 WASF2Q9Y6W5 498 aa21.46■■□□□ 1.03
VSX1-201ENST00000376707 C2CD4BA6NLJ0 364 aa21.45■■□□□ 1.02
VSX1-201ENST00000376707 GJB6O95452 261 aa21.45■■□□□ 1.02
VSX1-201ENST00000376707 JUPP14923 745 aa21.45■■□□□ 1.02
VSX1-201ENST00000376707 PTPN9P43378 593 aa21.45■■□□□ 1.02
VSX1-201ENST00000376707 MAPKAPK2P49137 400 aa21.45■■□□□ 1.02
VSX1-201ENST00000376707 CCNHP51946 323 aaPredicted RBP21.45■■□□□ 1.02
VSX1-201ENST00000376707 NRG1Q02297 640 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms