RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 TRIM17Q9Y577 477 aa11.86□□□□□ -0.51
DDR1-227ENST00000376570 PCDHA11Q9Y5I1 949 aa11.86□□□□□ -0.51
DDR1-227ENST00000376570 CDY1Q9Y6F8 540 aa11.86□□□□□ -0.51
DDR1-227ENST00000376570 TEX264Q9Y6I9 313 aa11.86□□□□□ -0.51
DDR1-227ENST00000376570 STX16-NPEPL1H3BU86 382 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 AURKAO14965 403 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 GLRA3O75311 464 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 CKMP06732 381 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 PGAM1P18669 254 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 OR1D2P34982 312 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 COPAP53621 1224 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 PURAQ00577 322 aaKnown RBP11.85□□□□□ -0.51
DDR1-227ENST00000376570 TMED1Q13445 227 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 KCNJ11Q14654 390 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 FAM83EQ2M2I3 478 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 PPM1LQ5SGD2 360 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 HPS6Q86YV9 775 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 OR10T2Q8NGX3 314 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 FNIP1Q8TF40 1166 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 NMD3Q96D46 503 aaKnown RBP11.85□□□□□ -0.51
DDR1-227ENST00000376570 FCRL3Q96P31 734 aaPredicted RBP11.85□□□□□ -0.51
DDR1-227ENST00000376570 SLC39A8Q9C0K1 460 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 FZD10Q9ULW2 581 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 PCDHGC4Q9Y5F7 938 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 ATP8B3O60423 1300 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 COL24A1Q17RW2 1714 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 FAM95CA0A1B0GW59 222 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 TM9SF1O15321 606 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 MGEA5O60502 916 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 ATP5HO75947 161 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 F2P00734 622 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 PRSS56P0CW18 603 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 ALDH7A1P49419 539 aaKnown RBP11.85□□□□□ -0.51
DDR1-227ENST00000376570 SERPINB9P50453 376 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 TPD52P55327 224 aaPredicted RBP11.85□□□□□ -0.51
DDR1-227ENST00000376570 WNT3AP56704 352 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 RPS24P62847 133 aaKnown RBP11.85□□□□□ -0.51
DDR1-227ENST00000376570 MRPS22P82650 360 aaKnown RBP11.85□□□□□ -0.51
DDR1-227ENST00000376570 GRB14Q14449 540 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 PARP6Q2NL67 630 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 ZNF697Q5TEC3 545 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 LPCAT4Q643R3 524 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 IYDQ6PHW0 289 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 TMC7Q7Z402 723 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 NT5DC4Q86YG4 428 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 CCNJLQ8IV13 435 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 SHCBP1Q8NEM2 672 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 STARD13Q9Y3M8 1113 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 TLL2Q9Y6L7 1015 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 THSD7AQ9UPZ6 1657 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 SMNDC1O75940 238 aaKnown RBP eCLIP11.85□□□□□ -0.51
DDR1-227ENST00000376570 RHOBTB1O94844 696 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 CES1P23141 567 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 GRIA4P48058 902 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 KCNQ1P51787 676 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 RBBP7Q16576 425 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 AGKQ53H12 422 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 C6orf10Q5SRN2 563 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 CST9Q5W186 159 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 KLC3Q6P597 504 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 SHKBP1Q8TBC3 707 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 BTBD10Q9BSF8 475 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 LATS2Q9NRM7 1088 aa11.85□□□□□ -0.51
DDR1-227ENST00000376570 PRR23AA6NEV1 266 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 H0Y626 953 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 TRIM16O95361 564 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 CHRNA1P02708 482 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 PAMP19021 973 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 CDH17Q12864 832 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 MILR1Q7Z6M3 343 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 SIGLEC10Q96LC7 697 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 CDRT15Q96T59 188 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 CADM1Q9BY67 442 aaKnown RBP11.84□□□□□ -0.51
DDR1-227ENST00000376570 ACE2Q9BYF1 805 aaPredicted RBP11.84□□□□□ -0.51
DDR1-227ENST00000376570 ILKAPQ9H0C8 392 aaPredicted RBP11.84□□□□□ -0.51
DDR1-227ENST00000376570 CATSPERBQ9H7T0 1116 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 RHBDL2Q9NX52 303 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 FARP1Q9Y4F1 1045 aaPredicted RBP11.84□□□□□ -0.51
DDR1-227ENST00000376570 RAMP2O60895 175 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 NDUFS3O75489 264 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 PARNO95453 639 aaKnown RBP11.84□□□□□ -0.51
DDR1-227ENST00000376570 ALDH2P05091 517 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 ABHD2P08910 425 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 VHLP40337 213 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 STX1BP61266 288 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 POLD3Q15054 466 aaPredicted RBP11.84□□□□□ -0.51
DDR1-227ENST00000376570 PFKFB4Q16877 469 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 NEPROQ6NW34 567 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 CNSTQ6PJW8 725 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 PIM3Q86V86 326 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 TREML1Q86YW5 311 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 SNRNP27Q8WVK2 155 aaKnown RBP11.84□□□□□ -0.51
DDR1-227ENST00000376570 C10orf82Q8WW14 230 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 SPATA17Q96L03 361 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 TBATAQ96M53 351 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 DEFB118Q96PH6 123 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 NPAS2Q99743 824 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 TBL1YQ9BQ87 522 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 POMKQ9H5K3 350 aa11.84□□□□□ -0.51
DDR1-227ENST00000376570 CCSER2Q9H7U1 834 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms