RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 HEBP1Q9NRV9 189 aa23.33■■□□□ 1.33
HLA-C-202ENST00000376237 NYNRINQ9P2P1 1898 aaKnown RBP23.33■■□□□ 1.33
HLA-C-202ENST00000376237 NARSO43776 548 aaKnown RBP23.33■■□□□ 1.32
HLA-C-202ENST00000376237 CD160O95971 181 aa23.33■■□□□ 1.32
HLA-C-202ENST00000376237 SRPRAP08240 638 aaKnown RBP23.33■■□□□ 1.32
HLA-C-202ENST00000376237 RPL22P35268 128 aaKnown RBP23.33■■□□□ 1.32
HLA-C-202ENST00000376237 GALK1P51570 392 aa23.33■■□□□ 1.32
HLA-C-202ENST00000376237 KDSRQ06136 332 aa23.33■■□□□ 1.32
HLA-C-202ENST00000376237 CNTD1Q8N815 330 aa23.33■■□□□ 1.32
HLA-C-202ENST00000376237 GLIS1Q8NBF1 620 aa23.33■■□□□ 1.32
HLA-C-202ENST00000376237 LRRC45Q96CN5 670 aa23.33■■□□□ 1.32
HLA-C-202ENST00000376237 AGAP3Q96P47 875 aa23.33■■□□□ 1.32
HLA-C-202ENST00000376237 CINPQ9BW66 212 aaPredicted RBP23.33■■□□□ 1.32
HLA-C-202ENST00000376237 ASIC3Q9UHC3 531 aa23.33■■□□□ 1.32
HLA-C-202ENST00000376237 PLA2G4CQ9UP65 541 aa23.33■■□□□ 1.32
HLA-C-202ENST00000376237 PRUNE2Q8WUY3 3088 aa23.32■■□□□ 1.32
HLA-C-202ENST00000376237 PRRT4C9JH25 899 aa23.32■■□□□ 1.32
HLA-C-202ENST00000376237 ZBTB24O43167 697 aaPredicted RBP23.32■■□□□ 1.32
HLA-C-202ENST00000376237 ZSCAN5DPP0CG00 497 aa23.32■■□□□ 1.32
HLA-C-202ENST00000376237 ETS1P14921 441 aa23.32■■□□□ 1.32
HLA-C-202ENST00000376237 NRLP54845 237 aa23.32■■□□□ 1.32
HLA-C-202ENST00000376237 PARP6Q2NL67 630 aa23.32■■□□□ 1.32
HLA-C-202ENST00000376237 LINGO4Q6UY18 593 aa23.32■■□□□ 1.32
HLA-C-202ENST00000376237 LEKR1Q6ZMV7 388 aa23.32■■□□□ 1.32
HLA-C-202ENST00000376237 ATP11CQ8NB49 1132 aa23.32■■□□□ 1.32
HLA-C-202ENST00000376237 KDM1BQ8NB78 822 aa23.32■■□□□ 1.32
HLA-C-202ENST00000376237 USP33Q8TEY7 942 aa23.32■■□□□ 1.32
HLA-C-202ENST00000376237 PPP1R2P1Q96PQ5 205 aa23.32■■□□□ 1.32
HLA-C-202ENST00000376237 CEP41Q9BYV8 373 aa23.32■■□□□ 1.32
HLA-C-202ENST00000376237 SLC8A2Q9UPR5 921 aa23.32■■□□□ 1.32
HLA-C-202ENST00000376237 ERVW-1Q9UQF0 538 aa23.32■■□□□ 1.32
HLA-C-202ENST00000376237 ATP8A1Q9Y2Q0 1164 aa23.32■■□□□ 1.32
HLA-C-202ENST00000376237 COL4A3Q01955 1670 aa23.31■■□□□ 1.32
HLA-C-202ENST00000376237 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.31■■□□□ 1.32
HLA-C-202ENST00000376237 NDC80O14777 642 aa23.31■■□□□ 1.32
HLA-C-202ENST00000376237 TMCC1O94876 653 aa23.31■■□□□ 1.32
HLA-C-202ENST00000376237 HEXIM1O94992 359 aaKnown RBP23.31■■□□□ 1.32
HLA-C-202ENST00000376237 ADCY8P40145 1251 aa23.31■■□□□ 1.32
HLA-C-202ENST00000376237 TNFRSF4P43489 277 aa23.31■■□□□ 1.32
HLA-C-202ENST00000376237 DRG2P55039 364 aaKnown RBP23.31■■□□□ 1.32
HLA-C-202ENST00000376237 MRPS25P82663 173 aaKnown RBP23.31■■□□□ 1.32
HLA-C-202ENST00000376237 MESP2Q0VG99 397 aa23.31■■□□□ 1.32
HLA-C-202ENST00000376237 CYTH1Q15438 398 aa23.31■■□□□ 1.32
HLA-C-202ENST00000376237 TRIP13Q15645 432 aaPredicted RBP23.31■■□□□ 1.32
HLA-C-202ENST00000376237 SLC44A4Q53GD3 710 aa23.31■■□□□ 1.32
HLA-C-202ENST00000376237 SH2D3CQ8N5H7 860 aa23.31■■□□□ 1.32
HLA-C-202ENST00000376237 ISG20Q96AZ6 181 aaKnown RBP23.31■■□□□ 1.32
HLA-C-202ENST00000376237 TRIM51Q9BSJ1 452 aa23.31■■□□□ 1.32
HLA-C-202ENST00000376237 CEP44Q9C0F1 390 aa23.31■■□□□ 1.32
HLA-C-202ENST00000376237 POLR1EQ9GZS1 481 aaKnown RBP23.31■■□□□ 1.32
HLA-C-202ENST00000376237 NT5MQ9NPB1 228 aa23.31■■□□□ 1.32
HLA-C-202ENST00000376237 STARD13Q9Y3M8 1113 aa23.31■■□□□ 1.32
HLA-C-202ENST00000376237 MT-CO1P00395 513 aa23.3■■□□□ 1.32
HLA-C-202ENST00000376237 RHOXF2BP0C7M4 288 aa23.3■■□□□ 1.32
HLA-C-202ENST00000376237 SRCP12931 536 aa23.3■■□□□ 1.32
HLA-C-202ENST00000376237 CES1P23141 567 aa23.3■■□□□ 1.32
HLA-C-202ENST00000376237 FDFT1P37268 417 aa23.3■■□□□ 1.32
HLA-C-202ENST00000376237 CTSOP43234 321 aaPredicted RBP23.3■■□□□ 1.32
HLA-C-202ENST00000376237 ST8SIA6P61647 398 aa23.3■■□□□ 1.32
HLA-C-202ENST00000376237 SLC7A5Q01650 507 aa23.3■■□□□ 1.32
HLA-C-202ENST00000376237 NSUN2Q08J23 767 aaKnown RBP eCLIP23.3■■□□□ 1.32
HLA-C-202ENST00000376237 GPS1Q13098 491 aa23.3■■□□□ 1.32
HLA-C-202ENST00000376237 DUPD1Q68J44 220 aa23.3■■□□□ 1.32
HLA-C-202ENST00000376237 NAIF1Q69YI7 327 aaPredicted RBP23.3■■□□□ 1.32
HLA-C-202ENST00000376237 PRUNE1Q86TP1 453 aa23.3■■□□□ 1.32
HLA-C-202ENST00000376237 RPL10LQ96L21 214 aaKnown RBP23.3■■□□□ 1.32
HLA-C-202ENST00000376237 RHOXF2Q9BQY4 288 aa23.3■■□□□ 1.32
HLA-C-202ENST00000376237 GBA3Q9H227 469 aa23.3■■□□□ 1.32
HLA-C-202ENST00000376237 GLOD4Q9HC38 313 aa23.3■■□□□ 1.32
HLA-C-202ENST00000376237 TARSL2A2RTX5 802 aaKnown RBP23.29■■□□□ 1.32
HLA-C-202ENST00000376237 MAN2B1O00754 1011 aa23.29■■□□□ 1.32
HLA-C-202ENST00000376237 HLA-DQB2P05538 268 aa23.29■■□□□ 1.32
HLA-C-202ENST00000376237 DRD1P21728 446 aa23.29■■□□□ 1.32
HLA-C-202ENST00000376237 ALG1LQ6GMV1 187 aa23.29■■□□□ 1.32
HLA-C-202ENST00000376237 TXNDC11Q6PKC3 985 aa23.29■■□□□ 1.32
HLA-C-202ENST00000376237 TSEN2Q8NCE0 465 aaKnown RBP23.29■■□□□ 1.32
HLA-C-202ENST00000376237 BBOF1Q8ND07 529 aa23.29■■□□□ 1.32
HLA-C-202ENST00000376237 SEC14L1Q92503 715 aa23.29■■□□□ 1.32
HLA-C-202ENST00000376237 ZNF419Q96HQ0 510 aaPredicted RBP23.29■■□□□ 1.32
HLA-C-202ENST00000376237 MGME1Q9BQP7 344 aa23.29■■□□□ 1.32
HLA-C-202ENST00000376237 RSPH14Q9UHP6 348 aa23.29■■□□□ 1.32
HLA-C-202ENST00000376237 DMGDHQ9UI17 866 aaKnown RBP23.29■■□□□ 1.32
HLA-C-202ENST00000376237 ACTL7AQ9Y615 435 aa23.29■■□□□ 1.32
HLA-C-202ENST00000376237 TICRRQ7Z2Z1 1910 aa23.29■■□□□ 1.32
HLA-C-202ENST00000376237 NPC1O15118 1278 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 ATP9BO43861 1147 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 CD68P34810 354 aaPredicted RBP23.28■■□□□ 1.32
HLA-C-202ENST00000376237 VPS41P49754 854 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 RHOAP61586 193 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 GRSF1Q12849 480 aaKnown RBP eCLIP23.28■■□□□ 1.32
HLA-C-202ENST00000376237 PRPSAP1Q14558 356 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 TMEM196Q5HYL7 178 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 PCGF5Q86SE9 256 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 RUBCNQ92622 972 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 MRGPRX3Q96LB0 322 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 FCRL5Q96RD9 977 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 SLC25A51Q9H1U9 297 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 FBRSL1Q9HCM7 1045 aaKnown RBP23.28■■□□□ 1.32
HLA-C-202ENST00000376237 RAB6BQ9NRW1 208 aa23.28■■□□□ 1.32
HLA-C-202ENST00000376237 TTLL3Q9Y4R7 772 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms