RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 BCAT1P54687 386 aa11.98□□□□□ -0.49
MCF2L-202ENST00000375597 CLVS1Q8IUQ0 354 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-202ENST00000375597 ZFP28Q8NHY6 868 aa11.98□□□□□ -0.49
MCF2L-202ENST00000375597 Q9H521 79 aa11.98□□□□□ -0.49
MCF2L-202ENST00000375597 NFKBIEO00221 500 aa11.98□□□□□ -0.49
MCF2L-202ENST00000375597 PIGRP01833 764 aa11.98□□□□□ -0.49
MCF2L-202ENST00000375597 PCNAP12004 261 aa11.98□□□□□ -0.49
MCF2L-202ENST00000375597 AOC1P19801 751 aa11.98□□□□□ -0.49
MCF2L-202ENST00000375597 HMGB2P26583 209 aaKnown RBP11.98□□□□□ -0.49
MCF2L-202ENST00000375597 SCN4BQ8IWT1 228 aa11.98□□□□□ -0.49
MCF2L-202ENST00000375597 FAM47BQ8NA70 645 aa11.98□□□□□ -0.49
MCF2L-202ENST00000375597 BEST2Q8NFU1 509 aa11.98□□□□□ -0.49
MCF2L-202ENST00000375597 PDCD6IPQ8WUM4 868 aaKnown RBP11.98□□□□□ -0.49
MCF2L-202ENST00000375597 KLHL5Q96PQ7 755 aa11.98□□□□□ -0.49
MCF2L-202ENST00000375597 NR1H4Q96RI1 486 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-202ENST00000375597 FZD8Q9H461 694 aa11.98□□□□□ -0.49
MCF2L-202ENST00000375597 MTMR10Q9NXD2 777 aa11.98□□□□□ -0.49
MCF2L-202ENST00000375597 BRWD3Q6RI45 1802 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 E7ENX8 843 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 GSRP00390 522 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 C1QAP02745 245 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 NCK1P16333 377 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 YBX3P16989 372 aaKnown RBP eCLIP11.97□□□□□ -0.49
MCF2L-202ENST00000375597 CDH5P33151 784 aaPredicted RBP11.97□□□□□ -0.49
MCF2L-202ENST00000375597 RPL14P50914 215 aaKnown RBP11.97□□□□□ -0.49
MCF2L-202ENST00000375597 DYNC1I2Q13409 638 aaKnown RBP11.97□□□□□ -0.49
MCF2L-202ENST00000375597 TUBB3Q13509 450 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 SEMA5AQ13591 1074 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 FBXO47Q5MNV8 452 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 METTL25Q8N6Q8 603 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 ANKRD27Q96NW4 1050 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 ZNF670Q9BS34 389 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 TKTL2Q9H0I9 626 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 LRRC40Q9H9A6 602 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 COL4A5P29400 1685 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 UBA6A0AVT1 1052 aaPredicted RBP11.97□□□□□ -0.49
MCF2L-202ENST00000375597 ERI2A8K979 691 aaKnown RBP11.97□□□□□ -0.49
MCF2L-202ENST00000375597 PPP6CO00743 305 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 THRAP10827 490 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 ME2P23368 584 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 ATP1A4Q13733 1029 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 ZNF789Q5FWF6 425 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 RBM20Q5T481 1227 aaKnown RBP11.97□□□□□ -0.49
MCF2L-202ENST00000375597 LPCAT2Q7L5N7 544 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 FAM35AQ86V20 835 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 PDZD8Q8NEN9 1154 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 QKIQ96PU8 341 aaKnown RBP eCLIP11.97□□□□□ -0.49
MCF2L-202ENST00000375597 ALG9Q9H6U8 611 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 GJD2Q9UKL4 321 aa11.97□□□□□ -0.49
MCF2L-202ENST00000375597 A0A0U1RQS6 177 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 PLOD2O00469 737 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 TSPAN1O60635 241 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 FAM58BPP0C7Q3 252 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 GRK2P25098 689 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 SLC7A2P52569 658 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 PPIDQ08752 370 aaKnown RBP11.96□□□□□ -0.49
MCF2L-202ENST00000375597 BST2Q10589 180 aaKnown RBP11.96□□□□□ -0.49
MCF2L-202ENST00000375597 FAM83EQ2M2I3 478 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 ARMCX2Q7L311 632 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 ARCQ7LC44 396 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 PIM3Q86V86 326 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 CEP97Q8IW35 865 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 FAM81AQ8TBF8 368 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 BHMTQ93088 406 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 LRCH3Q96II8 777 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 ZNF180Q9UJW8 692 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 SYNPO2Q9UMS6 1093 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 EFR3BQ9Y2G0 817 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 XPOTO43592 962 aaKnown RBP11.96□□□□□ -0.49
MCF2L-202ENST00000375597 BAIAP3O94812 1187 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 PTPN3P26045 913 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 PTPN7P35236 360 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 ECT2LQ008S8 904 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 BEX3Q00994 111 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 LRRC8BQ6P9F7 803 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 GPRIN1Q7Z2K8 1008 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 DNAJB14Q8TBM8 379 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 SLC35F5Q8WV83 523 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 CNDP1Q96KN2 507 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 ARHGEF38Q9NXL2 777 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 MAP3K20Q9NYL2 800 aaKnown RBP11.96□□□□□ -0.49
MCF2L-202ENST00000375597 MOCS1Q9NZB8 636 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 EPS15L1Q9UBC2 864 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 CLEC11AQ9Y240 323 aa11.96□□□□□ -0.49
MCF2L-202ENST00000375597 SCN1AP35498 2009 aa11.96□□□□□ -0.5
MCF2L-202ENST00000375597 GIPC1O14908 333 aa11.96□□□□□ -0.5
MCF2L-202ENST00000375597 HDAC3O15379 428 aa11.96□□□□□ -0.5
MCF2L-202ENST00000375597 ENDOD1O94919 500 aa11.96□□□□□ -0.5
MCF2L-202ENST00000375597 SIX3O95343 332 aaPredicted RBP11.96□□□□□ -0.5
MCF2L-202ENST00000375597 C22orf31O95567 290 aa11.96□□□□□ -0.5
MCF2L-202ENST00000375597 GNAO1P09471 354 aa11.96□□□□□ -0.5
MCF2L-202ENST00000375597 SOX4Q06945 474 aaPredicted RBP11.96□□□□□ -0.5
MCF2L-202ENST00000375597 DNAJC14Q6Y2X3 702 aaPredicted RBP11.96□□□□□ -0.5
MCF2L-202ENST00000375597 ZBTB49Q6ZSB9 765 aa11.96□□□□□ -0.5
MCF2L-202ENST00000375597 ACTRT2Q8TDY3 377 aa11.96□□□□□ -0.5
MCF2L-202ENST00000375597 LPGAT1Q92604 370 aa11.96□□□□□ -0.5
MCF2L-202ENST00000375597 RGS17Q9UGC6 210 aaPredicted RBP11.96□□□□□ -0.5
MCF2L-202ENST00000375597 PGAP2Q9UHJ9 254 aa11.96□□□□□ -0.5
MCF2L-202ENST00000375597 COPG1Q9Y678 874 aaKnown RBP11.96□□□□□ -0.5
MCF2L-202ENST00000375597 TTC3P53804 2025 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms