RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 LRRC8DQ7L1W4 858 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 IGDCC3Q8IVU1 814 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 DSELQ8IZU8 1212 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 COMMD8Q9NX08 183 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 CHCHD3Q9NX63 227 aaKnown RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 CPA4Q9UI42 421 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 FAM50BQ9Y247 325 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 PCDHB7Q9Y5E2 793 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 KCNU1A8MYU2 1149 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 MSI1O43347 362 aaKnown RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 PIRTP0C851 137 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 TSHRP16473 764 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 PTPN1P18031 435 aaKnown RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 PSMB9P28065 219 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 SERPINB1P30740 379 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 ARL2P36404 184 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 LHX1P48742 406 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 OGDHQ02218 1023 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 CHADLQ6NUI6 762 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 PMF1Q6P1K2 205 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 TRMT10BQ6PF06 316 aaKnown RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 GLT6D1Q7Z4J2 308 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 DNAJC1Q96KC8 554 aaKnown RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 RSL24D1Q9UHA3 163 aaKnown RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 RGSL1A5PLK6 1076 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 NPEPPSL1A6NEC2 478 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 C5orf58C9J3I9 102 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 PDHXO00330 501 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 LYNP07948 512 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 OCM2P0CE71 109 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 OCMP0CE72 109 aaPredicted RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 CHI3L1P36222 383 aaPredicted RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 C21orf59P57076 290 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 FAM117BQ6P1L5 589 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 WDR60Q8WVS4 1066 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 PDZD7Q9H5P4 517 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 COPG2Q9UBF2 871 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 XPR1Q9UBH6 696 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 PTGES3LE9PB15 166 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 CILPO75339 1184 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 WDR47O94967 919 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 GALK1P51570 392 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 ROR2Q01974 943 aaKnown RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 NR6A1Q15406 480 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 FBXO48Q5FWF7 155 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 IL27RAQ6UWB1 636 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 ERO1BQ86YB8 467 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 ZC3H3Q8IXZ2 948 aaKnown RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 DCP1BQ8IZD4 617 aaKnown RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 TERB1Q8NA31 727 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 FBXO30Q8TB52 745 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 PANX3Q96QZ0 392 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 NAT9Q9BTE0 207 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 TRIM54Q9BYV2 358 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 CATSPERZQ9NTU4 200 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 WDR70Q9NW82 654 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 ZMYND8Q9ULU4 1186 aaPredicted RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 MYPNQ86TC9 1320 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 TMEM247A6NEH6 219 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 LTA4HP09960 611 aaKnown RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 CYP4B1P13584 511 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 RECQLP46063 649 aaPredicted RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 SNX17Q15036 470 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 TRPM4Q8TD43 1214 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 MED8Q96G25 268 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 CSPG4P5Q96PW8 444 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 NXF3Q9H4D5 531 aaKnown RBP6.63□□□□□ -1.35
SMC1A-202ENST00000375340 LIMD1Q9UGP4 676 aa6.63□□□□□ -1.35
SMC1A-202ENST00000375340 MOXD2PA6NHM9 499 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 HNRNPCL2B2RXH8 293 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 BCL10O95999 233 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 PTP4A2Q12974 167 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 PRMT9Q6P2P2 845 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 TMEM26Q6ZUK4 368 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 EXOSC4Q9NPD3 245 aaKnown RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 NDUFA13Q9P0J0 144 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 PNMA8BQ9ULN7 279 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-202ENST00000375340 ATP6AP2A0A1C7CYW4 349 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 NCAM2O15394 837 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 ATP6AP2O75787 350 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 NPR3P17342 541 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 MBTD1Q05BQ5 628 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 GPR107Q5VW38 600 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 CLEC6AQ6EIG7 209 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 PLEKHH3Q7Z736 793 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 ZNF276Q8N554 614 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 CD101Q93033 1021 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 MYLPFQ96A32 169 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 P2RY11Q96G91 374 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 IL22Q9GZX6 179 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 LHX5Q9H2C1 402 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 ZNF556Q9HAH1 456 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 SPAG4Q9NPE6 437 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 TMEM161AQ9NX61 479 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 TRHDEQ9UKU6 1024 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 SYNPO2Q9UMS6 1093 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 TRIM38O00635 465 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 NMBRP28336 390 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 TBX4P57082 545 aa6.62□□□□□ -1.35
SMC1A-202ENST00000375340 FRG1Q14331 258 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms