RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 SEPT6Q14141 434 aa17.89■□□□□ 0.45
H2AFX-201ENST00000375167 PPP1R26Q5T8A7 1209 aaPredicted RBP17.89■□□□□ 0.45
H2AFX-201ENST00000375167 C1QL3Q5VWW1 255 aa17.89■□□□□ 0.45
H2AFX-201ENST00000375167 FAM114A1Q8IWE2 563 aa17.89■□□□□ 0.45
H2AFX-201ENST00000375167 APCDD1Q8J025 514 aa17.89■□□□□ 0.45
H2AFX-201ENST00000375167 ARL10Q8N8L6 244 aa17.89■□□□□ 0.45
H2AFX-201ENST00000375167 NKD1Q969G9 470 aa17.89■□□□□ 0.45
H2AFX-201ENST00000375167 ULBP1Q9BZM6 244 aa17.89■□□□□ 0.45
H2AFX-201ENST00000375167 GULP1Q9UBP9 304 aa17.89■□□□□ 0.45
H2AFX-201ENST00000375167 RABGEF1Q9UJ41 708 aa17.89■□□□□ 0.45
H2AFX-201ENST00000375167 A0A1W2PQM1 296 aa17.88■□□□□ 0.45
H2AFX-201ENST00000375167 CLIC2O15247 247 aa17.88■□□□□ 0.45
H2AFX-201ENST00000375167 RPN1P04843 607 aaKnown RBP17.88■□□□□ 0.45
H2AFX-201ENST00000375167 HOXD13P35453 343 aa17.88■□□□□ 0.45
H2AFX-201ENST00000375167 SULT2A1Q06520 285 aa17.88■□□□□ 0.45
H2AFX-201ENST00000375167 ACCSLQ4AC99 568 aa17.88■□□□□ 0.45
H2AFX-201ENST00000375167 SEL1L3Q68CR1 1132 aa17.88■□□□□ 0.45
H2AFX-201ENST00000375167 PM20D1Q6GTS8 502 aa17.88■□□□□ 0.45
H2AFX-201ENST00000375167 RBFAQ8N0V3 343 aa17.88■□□□□ 0.45
H2AFX-201ENST00000375167 APOBEC4Q8WW27 367 aaKnown RBP17.88■□□□□ 0.45
H2AFX-201ENST00000375167 UBXN6Q9BZV1 441 aa17.88■□□□□ 0.45
H2AFX-201ENST00000375167 LRRN3Q9H3W5 708 aa17.88■□□□□ 0.45
H2AFX-201ENST00000375167 MAGEF1Q9HAY2 307 aa17.88■□□□□ 0.45
H2AFX-201ENST00000375167 PRDM8Q9NQV8 689 aa17.88■□□□□ 0.45
H2AFX-201ENST00000375167 DKK3Q9UBP4 350 aa17.88■□□□□ 0.45
H2AFX-201ENST00000375167 ZFR2Q9UPR6 939 aaKnown RBP17.88■□□□□ 0.45
H2AFX-201ENST00000375167 ZFHX3Q15911 3703 aa17.87■□□□□ 0.45
H2AFX-201ENST00000375167 MCF2LO15068 1137 aa17.87■□□□□ 0.45
H2AFX-201ENST00000375167 EIF3DO15371 548 aaKnown RBP eCLIP17.87■□□□□ 0.453e-24■□□□□ 10.1
H2AFX-201ENST00000375167 GCATO75600 419 aa17.87■□□□□ 0.45
H2AFX-201ENST00000375167 IGLV3-27P01718 113 aa17.87■□□□□ 0.45
H2AFX-201ENST00000375167 C4BPAP04003 597 aaKnown RBP17.87■□□□□ 0.45
H2AFX-201ENST00000375167 PRR29P0C7W0 189 aa17.87■□□□□ 0.45
H2AFX-201ENST00000375167 C1orf61Q13536 156 aa17.87■□□□□ 0.45
H2AFX-201ENST00000375167 TMEM259Q4ZIN3 620 aa17.87■□□□□ 0.45
H2AFX-201ENST00000375167 BSPRYQ5W0U4 402 aa17.87■□□□□ 0.45
H2AFX-201ENST00000375167 SPOPLQ6IQ16 392 aa17.87■□□□□ 0.45
H2AFX-201ENST00000375167 BHLHA9Q7RTU4 235 aa17.87■□□□□ 0.45
H2AFX-201ENST00000375167 ZC3H18Q86VM9 953 aaKnown RBP17.87■□□□□ 0.45
H2AFX-201ENST00000375167 CFAP52Q8N1V2 620 aa17.87■□□□□ 0.45
H2AFX-201ENST00000375167 TBATAQ96M53 351 aa17.87■□□□□ 0.45
H2AFX-201ENST00000375167 GDPD2Q9HCC8 539 aa17.87■□□□□ 0.45
H2AFX-201ENST00000375167 DYRK4Q9NR20 520 aa17.87■□□□□ 0.45
H2AFX-201ENST00000375167 CHMP5Q9NZZ3 219 aa17.87■□□□□ 0.45
H2AFX-201ENST00000375167 TP53TG5Q9Y2B4 290 aa17.87■□□□□ 0.45
H2AFX-201ENST00000375167 A0A1B0GVL5 298 aa17.86■□□□□ 0.45
H2AFX-201ENST00000375167 LRRIQ3A6PVS8 624 aaPredicted RBP17.86■□□□□ 0.45
H2AFX-201ENST00000375167 EFCAB7A8K855 629 aa17.86■□□□□ 0.45
H2AFX-201ENST00000375167 KPNA3O00505 521 aaPredicted RBP17.86■□□□□ 0.45
H2AFX-201ENST00000375167 CAPN5O15484 640 aaPredicted RBP17.86■□□□□ 0.45
H2AFX-201ENST00000375167 TGFB1I1O43294 461 aa17.86■□□□□ 0.45
H2AFX-201ENST00000375167 CLDN1O95832 211 aa17.86■□□□□ 0.45
H2AFX-201ENST00000375167 ASS1P00966 412 aaKnown RBP17.86■□□□□ 0.45
H2AFX-201ENST00000375167 PFKFB1P16118 471 aa17.86■□□□□ 0.45
H2AFX-201ENST00000375167 C1QBPQ07021 282 aaKnown RBP17.86■□□□□ 0.45
H2AFX-201ENST00000375167 EIF2B5Q13144 721 aaKnown RBP17.86■□□□□ 0.45
H2AFX-201ENST00000375167 NADSYN1Q6IA69 706 aa17.86■□□□□ 0.45
H2AFX-201ENST00000375167 CNNM4Q6P4Q7 775 aa17.86■□□□□ 0.45
H2AFX-201ENST00000375167 KYQ8NBH2 561 aa17.86■□□□□ 0.45
H2AFX-201ENST00000375167 SCG3Q8WXD2 468 aaKnown RBP17.86■□□□□ 0.45
H2AFX-201ENST00000375167 NDRG1Q92597 394 aaKnown RBP17.86■□□□□ 0.45
H2AFX-201ENST00000375167 AZIN2Q96A70 460 aa17.86■□□□□ 0.45
H2AFX-201ENST00000375167 LRRC61Q9BV99 259 aa17.86■□□□□ 0.45
H2AFX-201ENST00000375167 SLC13A1Q9BZW2 595 aa17.86■□□□□ 0.45
H2AFX-201ENST00000375167 CDH19Q9H159 772 aa17.86■□□□□ 0.45
H2AFX-201ENST00000375167 ABCC13Q9NSE7 274 aa17.86■□□□□ 0.45
H2AFX-201ENST00000375167 AKAP7Q9P0M2 348 aaPredicted RBP17.86■□□□□ 0.45
H2AFX-201ENST00000375167 USP25Q9UHP3 1055 aa17.86■□□□□ 0.45
H2AFX-201ENST00000375167 DOLKQ9UPQ8 538 aa17.86■□□□□ 0.45
H2AFX-201ENST00000375167 HIVEP3Q5T1R4 2406 aa17.86■□□□□ 0.45
H2AFX-201ENST00000375167 FAM237AA0A1B0GTK4 181 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 WIPF3A6NGB9 483 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 CD58P19256 250 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 ITGB7P26010 798 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 SNRPFP62306 86 aaKnown RBP17.85■□□□□ 0.45
H2AFX-201ENST00000375167 ZFP36L1Q07352 338 aaKnown RBP17.85■□□□□ 0.45
H2AFX-201ENST00000375167 SLC12A1Q13621 1099 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 MS4A13Q5J8X5 152 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 Q6ZVU0 165 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 CCNJLQ8IV13 435 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 PHACTR4Q8IZ21 702 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.85■□□□□ 0.453e-6■■■□□ 16.7
H2AFX-201ENST00000375167 OR6C4Q8NGE1 309 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 PLEKHO2Q8TD55 490 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 ERCC4Q92889 916 aaPredicted RBP17.85■□□□□ 0.45
H2AFX-201ENST00000375167 RNF34Q969K3 372 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 MYEOVQ96EZ4 313 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 C7orf25Q9BPX7 421 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 SLC17A9Q9BYT1 436 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 TCEAL2Q9H3H9 227 aaPredicted RBP17.85■□□□□ 0.45
H2AFX-201ENST00000375167 CYP3A43Q9HB55 503 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 CASS4Q9NQ75 786 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 DONSONQ9NYP3 566 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 SIRPGQ9P1W8 387 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 GGT7Q9UJ14 662 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 HPSEQ9Y251 543 aa17.85■□□□□ 0.45
H2AFX-201ENST00000375167 FPGTO14772 594 aa17.84■□□□□ 0.45
H2AFX-201ENST00000375167 YY2O15391 372 aa17.84■□□□□ 0.45
H2AFX-201ENST00000375167 BNIP3LO60238 219 aa17.84■□□□□ 0.45
H2AFX-201ENST00000375167 EXOC3O60645 756 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms