RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 KDELC1Q6UW63 502 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 CDHR3Q6ZTQ4 885 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 IPMKQ8NFU5 416 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 SPOCK2Q92563 424 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ISL2Q96A47 359 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 FAM111AQ96PZ2 611 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 FICDQ9BVA6 458 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 VPS45Q9NRW7 570 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 STK39Q9UEW8 545 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PHTF1Q9UMS5 762 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PSAT1Q9Y617 370 aa18.3■□□□□ 0.52
HLA-DQB1-201ENST00000374943 KIAA0100Q14667 2235 aaKnown RBP18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 J3KR12 359 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 MYO1CO00159 1063 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 GJB5O95377 273 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ITGA2BP08514 1039 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 SLC11A2P49281 568 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 HARS2P49590 506 aaKnown RBP18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 VEPH1Q14D04 833 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 RANBP10Q6VN20 620 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 FAM47EQ6ZV65 393 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 TMCO2Q7Z6W1 182 aaPredicted RBP18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 TCEAL8Q8IYN2 117 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 TMEM199Q8N511 208 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 NSMCE1Q8WV22 266 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 MFSD3Q96ES6 412 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 MYEOVQ96EZ4 313 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 MRGPRX2Q96LB1 330 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 RBBP8Q99708 897 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 NACA2Q9H009 215 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 C12orf65Q9H3J6 166 aaKnown RBP18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ARNT2Q9HBZ2 717 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ATP13A1Q9HD20 1204 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 CHRAC1Q9NRG0 131 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 TXNDC16Q9P2K2 825 aa18.29■□□□□ 0.52
HLA-DQB1-201ENST00000374943 IL1BP01584 269 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ALDOAP04075 364 aaKnown RBP18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 TPH1P17752 444 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 OR1E1P30953 314 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 SLC6A4P31645 630 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 SERPINB4P48594 390 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 CSE1LP55060 971 aaKnown RBP18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 CREMQ03060 361 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 TEDDM1Q5T9Z0 273 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 RNF187Q5TA31 235 aaPredicted RBP18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 FAM117BQ6P1L5 589 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PKN3Q6P5Z2 889 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 KCNMB4Q86W47 210 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 LGI2Q8N0V4 545 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 NDUFAF2Q8N183 169 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PSMG2Q969U7 264 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 TADA1Q96BN2 335 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 FSD1LQ9BXM9 530 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PCMTD2Q9NV79 361 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 NSMCE4AQ9NXX6 385 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 KLF11O14901 512 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PRAMEF11O60813 436 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 RAG1P15918 1043 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 NMBRP28336 390 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 MAGEA12P43365 314 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 LIMK2P53671 638 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 SLC10A7Q0GE19 358 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 DBN1Q16643 649 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 RABGAP1LQ5R372 815 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 RNF43Q68DV7 783 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PDPK2PQ6A1A2 396 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 TRPM8Q7Z2W7 1104 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 CIR1Q86X95 450 aaPredicted RBP18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PPHLN1Q8NEY8 458 aaKnown RBP18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ZNF599Q96NL3 588 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 MCMBPQ9BTE3 642 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 MANSC1Q9H8J5 431 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 NT5MQ9NPB1 228 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 SLCO1B3Q9NPD5 702 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 UXTQ9UBK9 157 aaPredicted RBP18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 TCAF1Q9Y4C2 921 aa18.28■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ANKRD65E5RJM6 399 aa18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PMPCBO75439 489 aa18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 STC2O76061 302 aa18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 SPRP35270 261 aaPredicted RBP18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 CDH4P55283 916 aa18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 WNT3AP56704 352 aa18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PLD1Q13393 1074 aa18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 TMCO4Q5TGY1 634 aa18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 KYAT3Q6YP21 454 aaKnown RBP18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 TRIM42Q8IWZ5 723 aa18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PABPC5Q96DU9 382 aaKnown RBP18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 KLF16Q9BXK1 252 aaPredicted RBP18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 MAGEH1Q9H213 219 aa18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 ACTR5Q9H9F9 607 aaPredicted RBP18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 PDFQ9HBH1 243 aa18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 MRPL17Q9NRX2 175 aaKnown RBP18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 C20orf96Q9NUD7 363 aaPredicted RBP18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 IL1RAPL1Q9NZN1 696 aa18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 INSL5Q9Y5Q6 135 aa18.27■□□□□ 0.52
HLA-DQB1-201ENST00000374943 MTCL1Q9Y4B5 1905 aaKnown RBP18.27■□□□□ 0.51
HLA-DQB1-201ENST00000374943 H3BNC9 293 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 TPP1O14773 563 aa18.26■□□□□ 0.51
HLA-DQB1-201ENST00000374943 LILRB3O75022 631 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms