RNA–Protein interactions for RNA: ENST00000373433.8

RPRD1B-201, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1B, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-201ENST00000373433 PDAP1Q13442 181 aaKnown RBP11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 TUBB3Q13509 450 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 ATP1A4Q13733 1029 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 SEPT6Q14141 434 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 OVOS1Q6IE37 1185 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 TRMT10BQ6PF06 316 aaKnown RBP11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 PTAR1Q7Z6K3 402 aaPredicted RBP11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 CROCCP3Q8IVE0 287 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 LRRC52Q8N7C0 313 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 CATSPER1Q8NEC5 780 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 GRIN3AQ8TCU5 1115 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 SCLYQ96I15 445 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 SERPINI1Q99574 410 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 COLEC11Q9BWP8 271 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 TBC1D23Q9NUY8 699 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 CROCCQ5TZA2 2017 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 GOLGA8QA0A0J9YX86 632 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 GOLGA8OA6NCC3 632 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 GOLGA8NF8WBI6 632 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 NEMP1O14524 444 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 ATP5BP06576 529 aaKnown RBP11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 ACO1P21399 889 aaKnown RBP11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 LHX1P48742 406 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 SLC5A3P53794 718 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 TLE2Q04725 743 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 PIGHQ14442 188 aaPredicted RBP11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 TEDDM1Q5T9Z0 273 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 EMC1Q8N766 993 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 SLC2A14Q8TDB8 520 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 TMEM169Q96HH4 297 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 TBCCD1Q9NVR7 557 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 BRWD1Q9NSI6 2320 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 WDR90Q96KV7 1748 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 KIAA1217Q5T5P2 1943 aa11.37□□□□□ -0.59
RPRD1B-201ENST00000373433 LSM8O95777 96 aaKnown RBP11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 XRCC1P18887 633 aaPredicted RBP11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 MMP8P22894 467 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 THOP1P52888 689 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 CDH15P55291 814 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 YWHAZP63104 245 aaKnown RBP11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 YWHAHQ04917 246 aaPredicted RBP11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 IKBKEQ14164 716 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 LRRC38Q5VT99 294 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 PKP2Q99959 881 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 OSBPL6Q9BZF3 934 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 DHX35Q9H5Z1 703 aaKnown RBP11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 ARMC7Q9H6L4 198 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 AGO3Q9H9G7 860 aaKnown RBP11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 CACNG4Q9UBN1 327 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 STAP1Q9ULZ2 295 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 MICAL2O94851 1124 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 COL6A2P12110 1019 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 PRAMEP78395 509 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 APOFQ13790 326 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 MAP7D1Q3KQU3 841 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 NOMO2Q5JPE7 1267 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 ARCQ7LC44 396 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 ZSCAN18Q8TBC5 510 aaPredicted RBP11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 THAP11Q96EK4 314 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 TSEN34Q9BSV6 310 aaKnown RBP11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 DERAQ9Y315 318 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 E2F6O75461 281 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 FBXO21O94952 628 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 OCM2P0CE71 109 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 OCMP0CE72 109 aaPredicted RBP11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 CKBP12277 381 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 CCDC130P13994 396 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 TSHRP16473 764 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 DNAJB2P25686 324 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 IL1R2P27930 398 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 HOXA11P31270 313 aaPredicted RBP11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 ARL4AP40617 200 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 GJA8P48165 433 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 BCAT1P54687 386 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 TAF5Q15542 800 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 ADRM1Q16186 407 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 FSCBQ5H9T9 825 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 DENND1BQ6P3S1 775 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 BBS12Q6ZW61 710 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 SNX32Q86XE0 403 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 AGAP3Q96P47 875 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 LENG8Q96PV6 779 aaPredicted RBP11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 YME1L1Q96TA2 773 aa11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 MRPL45Q9BRJ2 306 aaKnown RBP11.36□□□□□ -0.59
RPRD1B-201ENST00000373433 ARL5CA6NH57 179 aa11.35□□□□□ -0.59
RPRD1B-201ENST00000373433 KCNN4O15554 427 aa11.35□□□□□ -0.59
RPRD1B-201ENST00000373433 CBFA2T3O75081 653 aa11.35□□□□□ -0.59
RPRD1B-201ENST00000373433 KRT7P08729 469 aa11.35□□□□□ -0.59
RPRD1B-201ENST00000373433 CRHR1P34998 444 aa11.35□□□□□ -0.59
RPRD1B-201ENST00000373433 RFC1P35251 1148 aaPredicted RBP11.35□□□□□ -0.59
RPRD1B-201ENST00000373433 HALP42357 657 aa11.35□□□□□ -0.59
RPRD1B-201ENST00000373433 TMED10P49755 219 aaKnown RBP11.35□□□□□ -0.59
RPRD1B-201ENST00000373433 CDK9P50750 372 aaKnown RBP11.35□□□□□ -0.59
RPRD1B-201ENST00000373433 MAP3K7CLP57077 242 aa11.35□□□□□ -0.59
RPRD1B-201ENST00000373433 GSTM4Q03013 218 aa11.35□□□□□ -0.59
RPRD1B-201ENST00000373433 ENPEPQ07075 957 aa11.35□□□□□ -0.59
RPRD1B-201ENST00000373433 FOXD4Q12950 439 aaPredicted RBP11.35□□□□□ -0.59
RPRD1B-201ENST00000373433 BTG3Q14201 252 aaPredicted RBP11.35□□□□□ -0.59
RPRD1B-201ENST00000373433 MGAT5BQ3V5L5 792 aa11.35□□□□□ -0.59
RPRD1B-201ENST00000373433 FAM171A1Q5VUB5 890 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms