RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ASPSCR1Q9BZE9 553 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 TMEM117Q9H0C3 514 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 SSU72Q9NP77 194 aaKnown RBP9.01□□□□□ -0.97
ATG4A-203ENST00000372232 OSGEPQ9NPF4 335 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 THG1LQ9NWX6 298 aaKnown RBP9.01□□□□□ -0.97
ATG4A-203ENST00000372232 TAS2R14Q9NYV8 317 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 SF3B1O75533 1304 aaKnown RBP eCLIP9.01□□□□□ -0.973e-8■■■■■ 315.9
ATG4A-203ENST00000372232 SYNGAP1Q96PV0 1343 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 ZNF541Q9H0D2 1346 aa9.01□□□□□ -0.97
ATG4A-203ENST00000372232 WDR91A4D1P6 747 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 GOLGA8JA6NMD2 632 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 JRKO75564 520 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 IL1BP01584 269 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 ADRB2P07550 413 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 CA4P22748 312 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 PKLRP30613 574 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 CPOXP36551 454 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 GPD2P43304 727 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 NDST2P52849 883 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 MLLT6P55198 1093 aaPredicted RBP9□□□□□ -0.97
ATG4A-203ENST00000372232 ARL4CP56559 192 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 PHC1P78364 1004 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 COX10Q12887 443 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 TRIP13Q15645 432 aaPredicted RBP9□□□□□ -0.97
ATG4A-203ENST00000372232 TBCCQ15814 346 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 SNRNP35Q16560 246 aaKnown RBP9□□□□□ -0.97
ATG4A-203ENST00000372232 RABGAP1LQ5R372 815 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 PPM1LQ5SGD2 360 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 FAM122CQ6P4D5 195 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 PGM2L1Q6PCE3 622 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 TMC5Q6UXY8 1006 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 CATSPERGQ6ZRH7 1159 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 DGLUCYQ7Z3D6 616 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 CBWD2Q8IUF1 395 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 APOBEC3FQ8IUX4 373 aaKnown RBP9□□□□□ -0.97
ATG4A-203ENST00000372232 PQLC1Q8N2U9 271 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 HM13Q8TCT9 377 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 BSNDQ8WZ55 320 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 CDKL2Q92772 493 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 NINJ1Q92982 152 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 CEP170P1Q96L14 293 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 SLC29A1Q99808 456 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 AGPAT1Q99943 283 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 TEX13BQ9BXU2 312 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 RMND5AQ9H871 391 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 IFT122Q9HBG6 1241 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 ARMCX1Q9P291 453 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 VANGL2Q9ULK5 521 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 PSMD13Q9UNM6 376 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 FNDC3AQ9Y2H6 1198 aaKnown RBP9□□□□□ -0.97
ATG4A-203ENST00000372232 IGSF9BQ9UPX0 1349 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 ARPC4-TTLL3A0A0A6YYG9 625 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 DENND3A2RUS2 1198 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 H3BNH8 94 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 CCRL2O00421 344 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 SNAP91O60641 907 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 BPNT1O95861 308 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 CAPNS1P04632 268 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 ABHD2P08910 425 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 GSTM1P09488 218 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 YBX3P16989 372 aaKnown RBP eCLIP9□□□□□ -0.97
ATG4A-203ENST00000372232 ABCB4P21439 1286 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 NUDT1P36639 197 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 SOX10P56693 466 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 STX1BP61266 288 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 ESRRGP62508 458 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 PRKCQQ04759 706 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 PPATQ06203 517 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 RARS2Q5T160 578 aaKnown RBP9□□□□□ -0.97
ATG4A-203ENST00000372232 SWSAP1Q6NVH7 229 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 LYSMD3Q7Z3D4 306 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 SETD3Q86TU7 594 aaPredicted RBP9□□□□□ -0.97
ATG4A-203ENST00000372232 KBTBD6Q86V97 674 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 CCDC28AQ8IWP9 274 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 CHERPQ8IWX8 916 aaKnown RBP9□□□□□ -0.97
ATG4A-203ENST00000372232 CPNE9Q8IYJ1 553 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 ADCY4Q8NFM4 1077 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 SLC20A1Q8WUM9 679 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 KBTBD7Q8WVZ9 684 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 ARHGEF26Q96DR7 871 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 METTL2AQ96IZ6 378 aaKnown RBP9□□□□□ -0.97
ATG4A-203ENST00000372232 ZNF512Q96ME7 567 aaPredicted RBP9□□□□□ -0.97
ATG4A-203ENST00000372232 THAP2Q9H0W7 228 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 TRIT1Q9H3H1 467 aaKnown RBP9□□□□□ -0.97
ATG4A-203ENST00000372232 SMARCAD1Q9H4L7 1026 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 NEK6Q9HC98 313 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 JPH1Q9HDC5 661 aaPredicted RBP9□□□□□ -0.97
ATG4A-203ENST00000372232 WDR6Q9NNW5 1121 aaKnown RBP9□□□□□ -0.97
ATG4A-203ENST00000372232 KMT5AQ9NQR1 393 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 PDLIM7Q9NR12 457 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 SEPT11Q9NVA2 429 aaKnown RBP9□□□□□ -0.97
ATG4A-203ENST00000372232 STMN3Q9NZ72 180 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 SOX13Q9UN79 622 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 PCDHB5Q9Y5E4 795 aa9□□□□□ -0.97
ATG4A-203ENST00000372232 H3BMQ9 156 aa8.99□□□□□ -0.97
ATG4A-203ENST00000372232 TMX2-CTNND1H3BSU7 103 aa8.99□□□□□ -0.97
ATG4A-203ENST00000372232 XPO1O14980 1071 aaKnown RBP8.99□□□□□ -0.97
ATG4A-203ENST00000372232 DYNC1LI2O43237 492 aaPredicted RBP8.99□□□□□ -0.97
ATG4A-203ENST00000372232 PSAPP07602 524 aa8.99□□□□□ -0.97
ATG4A-203ENST00000372232 COL6A1P12109 1028 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms