RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 TMEM237Q96Q45 408 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 AASDHPPTQ9NRN7 309 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 PSIP1O75475 530 aaKnown RBP13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 BCL10O95999 233 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 CD53P19397 219 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 SLC1A6P48664 564 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 PLPP4Q5VZY2 271 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 FAM45BPQ6NSW5 357 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 PTAR1Q7Z6K3 402 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 STRA8Q7Z7C7 330 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 LENG9Q96B70 501 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 TLR10Q9BXR5 811 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 ZNF446Q9NWS9 450 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 SLC27A5Q9Y2P5 690 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 DERAQ9Y315 318 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 ASTN1O14525 1302 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 NR5A2O00482 541 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 PRR23BQ6ZRT6 265 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 HTR3CQ8WXA8 447 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 WNT8BQ93098 351 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 AVENQ9NQS1 362 aaPredicted RBP13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 COPG2Q9UBF2 871 aa13.5□□□□□ -0.25
RAPGEF1-201ENST00000372189 SHPRHQ149N8 1683 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 ZSCAN5CA6NGD5 496 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 MOXD2PA6NHM9 499 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 KPNA3O00505 521 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 GLUD1P00367 558 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 RBP1P09455 135 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 SPATA31C1P0DKV0 1188 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 TBCELQ5QJ74 424 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 PRMT9Q6P2P2 845 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 CREG2Q8IUH2 290 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 MAGED4Q96JG8 741 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 TBATAQ96M53 351 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 ZCWPW1Q9H0M4 648 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 NINJ2Q9NZG7 142 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 KRT87PA6NCN2 255 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 OR6C75A6NL08 312 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 HACD1B0YJ81 288 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 SERPINE1P05121 402 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 IFI35P80217 286 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 CHERPQ8IWX8 916 aaKnown RBP13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 ZC3H10Q96K80 434 aaKnown RBP13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 NCKIPSDQ9NZQ3 722 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 FBXO10Q9UK96 956 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 FGF10O15520 208 aaPredicted RBP13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 LYPLA2O95372 231 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 ALADP13716 330 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 DARSP14868 501 aaKnown RBP13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 FASP25445 335 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 CDH17Q12864 832 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 TTMPQ5BVD1 217 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 CROCCP3Q8IVE0 287 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 ACTL9Q8TC94 416 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 VPS33AQ96AX1 596 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 ZDHHC6Q9H6R6 413 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 SMNDC1O75940 238 aaKnown RBP eCLIP13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 MAPK1P28482 360 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 PTPN6P29350 595 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 DNAAF5Q86Y56 855 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 TOP6BLQ8N6T0 577 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 CLHC1Q8NHS4 586 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 TCP10LQ8TDR4 215 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 MIEF2Q96C03 454 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 TTPALQ9BTX7 342 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 KIF13AQ9H1H9 1805 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 TCF7L2Q9NQB0 619 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 THAP1Q9NVV9 213 aa13.49□□□□□ -0.25
RAPGEF1-201ENST00000372189 PPP1R11O60927 126 aaPredicted RBP13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 NDUFS2O75306 463 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 FGF19O95750 216 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 SMPD1P17405 629 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 ATP6V1B2P21281 511 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 CDK16Q00536 496 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 MEA1Q16626 185 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 KCTD21Q4G0X4 260 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 FBXL19Q6PCT2 694 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 CACUL1Q86Y37 369 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 TSEN2Q8NCE0 465 aaKnown RBP13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 HSFY1Q96LI6 401 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 ZNF184Q99676 751 aaPredicted RBP13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 OMDQ99983 421 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 KCTD14Q9BQ13 255 aaPredicted RBP13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 CEP41Q9BYV8 373 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 VAV3Q9UKW4 847 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 AKAP12Q02952 1782 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 SLIT2O94813 1529 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 NT5C1B-RDH14C9J2C7 533 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 MIPP30301 263 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 CYP2C18P33260 490 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 CHKAP35790 457 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 PRKAA2P54646 552 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 HMBOX1Q6NT76 420 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 SLC24A5Q71RS6 500 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 TRMT11Q7Z4G4 463 aaKnown RBP13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 SH3RF1Q7Z6J0 888 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 TBL1YQ9BQ87 522 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 NXF3Q9H4D5 531 aaKnown RBP13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 MYRFQ9Y2G1 1151 aa13.48□□□□□ -0.25
RAPGEF1-201ENST00000372189 SH3GLB1Q9Y371 365 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms