RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 CHSY1Q86X52 802 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 HOMEZQ8IX15 550 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 ZNF296Q8WUU4 475 aaPredicted RBP13.04□□□□□ -0.32
GPC3-201ENST00000370818 LZICQ8WZA0 190 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 APBB2Q92870 758 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 FCRL3Q96P31 734 aaPredicted RBP13.04□□□□□ -0.32
GPC3-201ENST00000370818 CENPKQ9BS16 269 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 MANSC1Q9H8J5 431 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 CASS4Q9NQ75 786 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 SAR1AQ9NR31 198 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 MARCH5Q9NX47 278 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 IL1RAPL1Q9NZN1 696 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 ZNF212Q9UDV6 495 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 PLLPQ9Y342 182 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 NUMBLQ9Y6R0 609 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 ARHGAP42A6NI28 874 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 TMCC1O94876 653 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 ZNF33AQ06730 810 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 ABI1Q8IZP0 508 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 CRIPAKQ8N1N5 446 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 GPR152Q8TDT2 470 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 WDR60Q8WVS4 1066 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 TSGA13Q96PP4 275 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 CIDEBQ9UHD4 219 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 PCDHB7Q9Y5E2 793 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 PCDHB5Q9Y5E4 795 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 PSAT1Q9Y617 370 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 HS3ST4Q9Y661 456 aa13.04□□□□□ -0.32
GPC3-201ENST00000370818 VWA8A3KMH1 1905 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 ERI2A8K979 691 aaKnown RBP13.03□□□□□ -0.32
GPC3-201ENST00000370818 DFFAO00273 331 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 SOAT2O75908 522 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 SERPINB9P50453 376 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 SMAD1Q15797 465 aaKnown RBP13.03□□□□□ -0.32
GPC3-201ENST00000370818 ITPRIPL1Q6GPH6 555 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 RSPO2Q6UXX9 243 aaPredicted RBP13.03□□□□□ -0.32
GPC3-201ENST00000370818 TIFABQ6ZNK6 161 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 C14orf80Q86SX3 495 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 SLC39A13Q96H72 371 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 SERPINB11Q96P15 392 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 BTBD10Q9BSF8 475 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 SLC13A1Q9BZW2 595 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 MKS1Q9NXB0 559 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 IL37Q9NZH6 218 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 UBP1Q9NZI7 540 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 GMIPQ9P107 970 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 ZFP69BQ9UJL9 534 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 VANGL2Q9ULK5 521 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 E9PAM4 449 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 FGF10O15520 208 aaPredicted RBP13.03□□□□□ -0.32
GPC3-201ENST00000370818 CACNG3O60359 315 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 MAFKO60675 156 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 HNRNPCL1O60812 293 aaKnown RBP13.03□□□□□ -0.32
GPC3-201ENST00000370818 MOCS2O96007 188 aaPredicted RBP13.03□□□□□ -0.32
GPC3-201ENST00000370818 POLBP06746 335 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 ITGA2BP08514 1039 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 PABPC4LP0CB38 370 aaKnown RBP13.03□□□□□ -0.32
GPC3-201ENST00000370818 FGFR3P22607 806 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 CCNCP24863 283 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 HTR7P34969 479 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 MAGEA11P43364 429 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 SLC11A1P49279 550 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 BFSP2Q13515 415 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 MSANTD2Q6P1R3 559 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 PACS1Q6VY07 963 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 OTOP3Q7RTS5 596 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 TMEM135Q86UB9 458 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 KLHDC8BQ8IXV7 354 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 NAT14Q8WUY8 206 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 YIPF2Q9BWQ6 316 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 SLC39A8Q9C0K1 460 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.03□□□□□ -0.32
GPC3-201ENST00000370818 CRISPLD1Q9H336 500 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 FBXO44Q9H4M3 255 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 MPP6Q9NZW5 540 aa13.03□□□□□ -0.32
GPC3-201ENST00000370818 FAM92AA1XBS5 289 aa13.02□□□□□ -0.32
GPC3-201ENST00000370818 CCDC22O60826 627 aa13.02□□□□□ -0.32
GPC3-201ENST00000370818 FKTNO75072 461 aa13.02□□□□□ -0.32
GPC3-201ENST00000370818 VNN2O95498 520 aa13.02□□□□□ -0.32
GPC3-201ENST00000370818 TOP3BO95985 862 aaKnown RBP13.02□□□□□ -0.32
GPC3-201ENST00000370818 ERVK-10P10266 1014 aa13.02□□□□□ -0.32
GPC3-201ENST00000370818 PBX3P40426 434 aa13.02□□□□□ -0.32
GPC3-201ENST00000370818 MLLT6P55198 1093 aaPredicted RBP13.02□□□□□ -0.32
GPC3-201ENST00000370818 PIK3R6Q5UE93 754 aa13.02□□□□□ -0.32
GPC3-201ENST00000370818 ZNF280DQ6N043 979 aa13.02□□□□□ -0.32
GPC3-201ENST00000370818 CLNKQ7Z7G1 428 aa13.02□□□□□ -0.32
GPC3-201ENST00000370818 MTDHQ86UE4 582 aaKnown RBP13.02□□□□□ -0.32
GPC3-201ENST00000370818 TMEM173Q86WV6 379 aaPredicted RBP13.02□□□□□ -0.32
GPC3-201ENST00000370818 DNAAF3Q8N9W5 541 aa13.02□□□□□ -0.32
GPC3-201ENST00000370818 USP33Q8TEY7 942 aa13.02□□□□□ -0.32
GPC3-201ENST00000370818 CDKL2Q92772 493 aa13.02□□□□□ -0.32
GPC3-201ENST00000370818 CERS2Q96G23 380 aa13.02□□□□□ -0.32
GPC3-201ENST00000370818 APOL2Q9BQE5 337 aa13.02□□□□□ -0.32
GPC3-201ENST00000370818 CATSPERBQ9H7T0 1116 aa13.02□□□□□ -0.32
GPC3-201ENST00000370818 BFARQ9NZS9 450 aa13.02□□□□□ -0.32
GPC3-201ENST00000370818 TLR6Q9Y2C9 796 aa13.02□□□□□ -0.32
GPC3-201ENST00000370818 WASF2Q9Y6W5 498 aa13.02□□□□□ -0.32
GPC3-201ENST00000370818 ZCWPW2A0A1B0GU75 182 aa13.02□□□□□ -0.33
GPC3-201ENST00000370818 NT5C1B-RDH14C9J2C7 533 aa13.02□□□□□ -0.33
GPC3-201ENST00000370818 ALDOAP04075 364 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms