RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 KLHL23Q8NBE8 558 aa12.7□□□□□ -0.38
TMEM56-201ENST00000370203 PYDC1Q8WXC3 89 aa12.7□□□□□ -0.38
TMEM56-201ENST00000370203 MIEF2Q96C03 454 aa12.7□□□□□ -0.38
TMEM56-201ENST00000370203 NMRAL1Q9HBL8 299 aa12.7□□□□□ -0.38
TMEM56-201ENST00000370203 IMP3Q9NV31 184 aaKnown RBP12.7□□□□□ -0.38
TMEM56-201ENST00000370203 RAB23Q9ULC3 237 aa12.7□□□□□ -0.38
TMEM56-201ENST00000370203 SNTNA6NMZ2 147 aa12.7□□□□□ -0.38
TMEM56-201ENST00000370203 HPCAL1P37235 193 aa12.7□□□□□ -0.38
TMEM56-201ENST00000370203 TMED10P49755 219 aaKnown RBP12.7□□□□□ -0.38
TMEM56-201ENST00000370203 LSM3P62310 102 aaKnown RBP12.7□□□□□ -0.38
TMEM56-201ENST00000370203 CTBP1Q13363 440 aa12.7□□□□□ -0.38
TMEM56-201ENST00000370203 LEMD2Q8NC56 503 aa12.7□□□□□ -0.38
TMEM56-201ENST00000370203 OR52K2Q8NGK3 314 aa12.7□□□□□ -0.38
TMEM56-201ENST00000370203 DNAJB14Q8TBM8 379 aa12.7□□□□□ -0.38
TMEM56-201ENST00000370203 NSMCE2Q96MF7 247 aa12.7□□□□□ -0.38
TMEM56-201ENST00000370203 PPCSQ9HAB8 311 aa12.7□□□□□ -0.38
TMEM56-201ENST00000370203 TRUB2O95900 331 aaKnown RBP12.69□□□□□ -0.38
TMEM56-201ENST00000370203 NUP62P37198 522 aaPredicted RBP12.69□□□□□ -0.38
TMEM56-201ENST00000370203 ARF5P84085 180 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 NRG1Q02297 640 aaPredicted RBP12.69□□□□□ -0.38
TMEM56-201ENST00000370203 C1QBPQ07021 282 aaKnown RBP12.69□□□□□ -0.38
TMEM56-201ENST00000370203 NTRK3Q16288 839 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 XKR6Q5GH73 641 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 TMEM132CQ8N3T6 1108 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 CLHC1Q8NHS4 586 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 CD99L2Q8TCZ2 262 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 ACTRT1Q8TDG2 376 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 DNAJC18Q9H819 358 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 CAB39LQ9H9S4 337 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 ZW10O43264 779 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 SHBGP04278 402 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 RBBP4Q09028 425 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 DUSP4Q13115 394 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 IQSEC1Q6DN90 963 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 LINGO4Q6UY18 593 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 USP50Q70EL3 339 aaPredicted RBP12.69□□□□□ -0.38
TMEM56-201ENST00000370203 LGMNQ99538 433 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 TRIM8Q9BZR9 551 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 ZCCHC2Q9C0B9 1178 aaKnown RBP12.69□□□□□ -0.38
TMEM56-201ENST00000370203 AKAP7Q9P0M2 348 aaPredicted RBP12.69□□□□□ -0.38
TMEM56-201ENST00000370203 PXDNQ92626 1479 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 DNALI1O14645 258 aaPredicted RBP12.69□□□□□ -0.38
TMEM56-201ENST00000370203 ALAS2P22557 587 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 S100A3P33764 101 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 CIR1Q86X95 450 aaPredicted RBP12.69□□□□□ -0.38
TMEM56-201ENST00000370203 EID3Q8N140 333 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 SCAIQ8N9R8 606 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 PROX1Q92786 737 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 JSRP1Q96MG2 331 aaPredicted RBP12.69□□□□□ -0.38
TMEM56-201ENST00000370203 MYLK2Q9H1R3 596 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 TUBGCP4Q9UGJ1 667 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 SCN2BO60939 215 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 PIGNO95427 931 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 PSMD8P48556 350 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 CYP2A13Q16696 494 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 TAF2Q6P1X5 1199 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 KLHL24Q6TFL4 600 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 GCNT7Q6ZNI0 430 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 BHLHE22Q8NFJ8 381 aaPredicted RBP12.69□□□□□ -0.38
TMEM56-201ENST00000370203 SKA1Q96BD8 255 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 PPP1R16AQ96I34 528 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 PCDH9Q9HC56 1237 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 RGS14O43566 566 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 KDELR1P24390 212 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 PSMA3P25788 255 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 RPL4P36578 427 aaKnown RBP12.69□□□□□ -0.38
TMEM56-201ENST00000370203 SRP54P61011 504 aaKnown RBP12.69□□□□□ -0.38
TMEM56-201ENST00000370203 ZNF268Q14587 947 aaPredicted RBP12.69□□□□□ -0.38
TMEM56-201ENST00000370203 ZNF410Q86VK4 478 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 KYQ8NBH2 561 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 PNPT1Q8TCS8 783 aaKnown RBP12.69□□□□□ -0.38
TMEM56-201ENST00000370203 PMEPA1Q969W9 287 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 CDH9Q9ULB4 789 aa12.69□□□□□ -0.38
TMEM56-201ENST00000370203 RIMS1Q86UR5 1692 aaKnown RBP12.69□□□□□ -0.38
TMEM56-201ENST00000370203 LOC100506127A0A0U1RQW1 187 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 FKTNO75072 461 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 FARP2O94887 1054 aaPredicted RBP12.68□□□□□ -0.38
TMEM56-201ENST00000370203 CALB2P22676 271 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 GP5P40197 560 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 FAM83AQ86UY5 434 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 C3orf20Q8ND61 904 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 VPS33AQ96AX1 596 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 RAD51AP1Q96B01 352 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 B3GNT5Q9BYG0 378 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 FAM126AQ9BYI3 521 aaPredicted RBP12.68□□□□□ -0.38
TMEM56-201ENST00000370203 TNKS2Q9H2K2 1166 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.68□□□□□ -0.387e-7■■■■□ 26.2
TMEM56-201ENST00000370203 OGDHLQ9ULD0 1010 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 PCDHA3Q9Y5H8 950 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 TGFB3P10600 412 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 PABPC1P11940 636 aaKnown RBP12.68□□□□□ -0.38
TMEM56-201ENST00000370203 ALOX12P18054 663 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 MTAPQ13126 283 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 TNS4Q8IZW8 715 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 KLK6Q92876 244 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 OXNAD1Q96HP4 312 aaPredicted RBP12.68□□□□□ -0.38
TMEM56-201ENST00000370203 SEMA3CQ99985 751 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 PTPRUQ92729 1446 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 PXDNLA1KZ92 1463 aa12.68□□□□□ -0.38
TMEM56-201ENST00000370203 YDJCA8MPS7 323 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms