RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 PCDHGC3Q9UN70 934 aa12.55□□□□□ -0.4
RAP1A-202ENST00000369709 LTN1O94822 1766 aa12.55□□□□□ -0.4
RAP1A-202ENST00000369709 SUPT3HB4E1H0 165 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 H3BNH8 94 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 AURKAO14965 403 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 MMP8P22894 467 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 GMPRP36959 345 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 PRKAA2P54646 552 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 KRR1Q13601 381 aaKnown RBP12.54□□□□□ -0.4
RAP1A-202ENST00000369709 IKBKEQ14164 716 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 SQLEQ14534 574 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 TMTC4Q5T4D3 741 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 LIPMQ5VYY2 423 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 MBLAC2Q68D91 279 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 ZNF221Q9UK13 617 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 TRIM24O15164 1050 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 HTRA2O43464 458 aaPredicted RBP12.54□□□□□ -0.4
RAP1A-202ENST00000369709 HUS1O60921 280 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 MICAL2O94851 1124 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 TFEBP19484 476 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 GRIA1P42261 906 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 STILQ15468 1287 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 ZDHHC13Q8IUH4 622 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 LMO3Q8TAP4 145 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 SOX17Q9H6I2 414 aaPredicted RBP12.54□□□□□ -0.4
RAP1A-202ENST00000369709 AGO4Q9HCK5 861 aaKnown RBP12.54□□□□□ -0.4
RAP1A-202ENST00000369709 EI24O14681 340 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 TFECO14948 347 aaPredicted RBP12.54□□□□□ -0.4
RAP1A-202ENST00000369709 MED26O95402 600 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 IRF9Q00978 393 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 FRG1Q14331 258 aaKnown RBP12.54□□□□□ -0.4
RAP1A-202ENST00000369709 DLG2Q15700 870 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 FGD3Q5JSP0 725 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 KBTBD6Q86V97 674 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 ZFPM1Q8IX07 1006 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 ZNF276Q8N554 614 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 FBXO30Q8TB52 745 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 SLC35B2Q8TB61 432 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 CANT1Q8WVQ1 401 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 NAT9Q9BTE0 207 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 TOR3AQ9H497 397 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 PLEKHA5Q9HAU0 1116 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 SMPD3Q9NY59 655 aaPredicted RBP12.54□□□□□ -0.4
RAP1A-202ENST00000369709 MTF2Q9Y483 593 aaPredicted RBP12.54□□□□□ -0.4
RAP1A-202ENST00000369709 PCDHB12Q9Y5F1 795 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 NUMBLQ9Y6R0 609 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 CCR10P46092 362 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 MRPS5P82675 430 aaKnown RBP12.54□□□□□ -0.4
RAP1A-202ENST00000369709 POU6F1Q14863 301 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 NOMO1Q15155 1222 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 AMHR2Q16671 573 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 SPANXN3Q5MJ09 141 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 FAM196AQ6ZSG2 479 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 CLIP4Q8N3C7 705 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 FAR1Q8WVX9 515 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 NCSTNQ92542 709 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 MKL1Q969V6 931 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 ZHX1-C8orf76Q96EF9 292 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 GLT1D1Q96MS3 346 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 RUBCNLQ9H714 662 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 SIRPGQ9P1W8 387 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 XPR1Q9UBH6 696 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 NENFQ9UMX5 172 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 SNX9Q9Y5X1 595 aa12.54□□□□□ -0.4
RAP1A-202ENST00000369709 MRPL42Q9Y6G3 142 aaKnown RBP12.54□□□□□ -0.4
RAP1A-202ENST00000369709 KANSL1LA0AUZ9 987 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 DDTLA6NHG4 134 aaPredicted RBP12.53□□□□□ -0.4
RAP1A-202ENST00000369709 HNRNPCL2B2RXH8 293 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 TK2O00142 265 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 PAPSS1O43252 624 aaPredicted RBP12.53□□□□□ -0.4
RAP1A-202ENST00000369709 NCK1P16333 377 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 IL12RB1P42701 662 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 ECT2LQ008S8 904 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 PRKCQQ04759 706 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 CDH24Q86UP0 819 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 LGMNQ99538 433 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 GATA5Q9BWX5 397 aaPredicted RBP12.53□□□□□ -0.4
RAP1A-202ENST00000369709 ARL13BQ3SXY8 428 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 ZFP69Q49AA0 526 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 LRRC8DQ7L1W4 858 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 SCUBE3Q8IX30 993 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 PROX1Q92786 737 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 SNX8Q9Y5X2 465 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 SMIM18P0DKX4 95 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 RPS9P46781 194 aaKnown RBP12.53□□□□□ -0.4
RAP1A-202ENST00000369709 ST13P50502 369 aaKnown RBP12.53□□□□□ -0.4
RAP1A-202ENST00000369709 HK2P52789 917 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 TRIM32Q13049 653 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 UGCGQ16739 394 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 KIZQ2M2Z5 673 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 FAM98BQ52LJ0 330 aaKnown RBP12.53□□□□□ -0.4
RAP1A-202ENST00000369709 AGAP9Q5VTM2 703 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 PRR23CQ6ZRP0 262 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 RAVER1Q8IY67 606 aaKnown RBP12.53□□□□□ -0.4
RAP1A-202ENST00000369709 LRRC71Q8N4P6 559 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 IFT43Q96FT9 208 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 TUT1Q9H6E5 874 aaKnown RBP12.53□□□□□ -0.4
RAP1A-202ENST00000369709 BHMG1C9JSJ3 638 aaPredicted RBP12.53□□□□□ -0.4
RAP1A-202ENST00000369709 TBX1O43435 398 aa12.53□□□□□ -0.4
RAP1A-202ENST00000369709 RFPL1O75677 317 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms