RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 JUNP05412 331 aaKnown RBP16.42■□□□□ 0.22
CHD1L-203ENST00000369259 SPRP35270 261 aaPredicted RBP16.42■□□□□ 0.22
CHD1L-203ENST00000369259 MAPK10P53779 464 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 TGFB2P61812 414 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 LRP8Q14114 963 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 C15orf59Q2T9L4 293 aaPredicted RBP16.42■□□□□ 0.22
CHD1L-203ENST00000369259 C6orf10Q5SRN2 563 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 CANT1Q8WVQ1 401 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 CYGBQ8WWM9 190 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 FEM1CQ96JP0 617 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 MTG1Q9BT17 334 aaPredicted RBP16.42■□□□□ 0.22
CHD1L-203ENST00000369259 TARS2Q9BW92 718 aaKnown RBP16.42■□□□□ 0.22
CHD1L-203ENST00000369259 UPF3AQ9H1J1 476 aaKnown RBP16.42■□□□□ 0.22
CHD1L-203ENST00000369259 DHX35Q9H5Z1 703 aaKnown RBP16.42■□□□□ 0.22
CHD1L-203ENST00000369259 ZFYVE28Q9HCC9 887 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 VTA1Q9NP79 307 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 STBD1O95210 358 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 TFE3P19532 575 aaPredicted RBP16.42■□□□□ 0.22
CHD1L-203ENST00000369259 MLLT10P55197 1068 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 LIPMQ5VYY2 423 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 LRRC8EQ6NSJ5 796 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 DHFR2Q86XF0 187 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 IFNLR1Q8IU57 520 aaPredicted RBP16.42■□□□□ 0.22
CHD1L-203ENST00000369259 MINDY2Q8NBR6 621 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 RXFP2Q8WXD0 754 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 SEPT8Q92599 483 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 DCPSQ96C86 337 aaKnown RBP16.42■□□□□ 0.22
CHD1L-203ENST00000369259 ATXN7L3BQ96GX2 97 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 MASTLQ96GX5 879 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 RBBP8Q99708 897 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 MTMR12Q9C0I1 747 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 IL22Q9GZX6 179 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 KLHL25Q9H0H3 589 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 EHD1Q9H4M9 534 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 PIH1D1Q9NWS0 290 aaKnown RBP16.42■□□□□ 0.22
CHD1L-203ENST00000369259 CACNA2D2Q9NY47 1150 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 SFMBT1Q9UHJ3 866 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 PSME2Q9UL46 239 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 PCDHA10Q9Y5I2 948 aa16.42■□□□□ 0.22
CHD1L-203ENST00000369259 XIRP1Q702N8 1843 aaKnown RBP16.41■□□□□ 0.22
CHD1L-203ENST00000369259 NFIBO00712 420 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 CPNE6O95741 557 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 CLIC3O95833 236 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 ALOX5P09917 674 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 PDGFRAP16234 1089 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 TKTP29401 623 aaKnown RBP16.41■□□□□ 0.22
CHD1L-203ENST00000369259 TNK2Q07912 1038 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 ZNF846Q147U1 533 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 CDO1Q16878 200 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 DOK7Q18PE1 504 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 BOLA3Q53S33 107 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 AGAP7PQ5VUJ5 663 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 GADL1Q6ZQY3 521 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 EPHX4Q8IUS5 362 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 WDR49Q8IV35 697 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 OTUD5Q96G74 571 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 FBXL20Q96IG2 436 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 NAT9Q9BTE0 207 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 YTHDF1Q9BYJ9 559 aaKnown RBP16.41■□□□□ 0.22
CHD1L-203ENST00000369259 ZC3H12CQ9C0D7 883 aaKnown RBP16.41■□□□□ 0.22
CHD1L-203ENST00000369259 NDEL1Q9GZM8 345 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 KLHL3Q9UH77 587 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 VPS51Q9UID3 782 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 RNF103-CHMP3A0A140T963 221 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 HSPA8P11142 646 aaKnown RBP16.41■□□□□ 0.22
CHD1L-203ENST00000369259 RCVRNP35243 200 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 IDUAP35475 653 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 ASPAP45381 313 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 LIMK2P53671 638 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 SAMD4BQ5PRF9 694 aaKnown RBP16.41■□□□□ 0.22
CHD1L-203ENST00000369259 FSTL4Q6MZW2 842 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 TRNP1Q6NT89 227 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 SCYL2Q6P3W7 929 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 ZYG11AQ6WRX3 759 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 FAM160B2Q86V87 743 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 RDM1Q8NG50 284 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 OR2T34Q8NGX1 318 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 OR2T3Q8NH03 318 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 PNPT1Q8TCS8 783 aaKnown RBP16.41■□□□□ 0.22
CHD1L-203ENST00000369259 CERS2Q96G23 380 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 GPN2Q9H9Y4 310 aaPredicted RBP16.41■□□□□ 0.22
CHD1L-203ENST00000369259 FBXO40Q9UH90 709 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 HES2Q9Y543 173 aa16.41■□□□□ 0.22
CHD1L-203ENST00000369259 C2CD4BA6NLJ0 364 aa16.4■□□□□ 0.22
CHD1L-203ENST00000369259 CLDN25C9JDP6 229 aa16.4■□□□□ 0.22
CHD1L-203ENST00000369259 F5H423 210 aaPredicted RBP16.4■□□□□ 0.22
CHD1L-203ENST00000369259 K7ERI5 159 aa16.4■□□□□ 0.22
CHD1L-203ENST00000369259 APOA4P06727 396 aa16.4■□□□□ 0.22
CHD1L-203ENST00000369259 OPRL1P41146 370 aa16.4■□□□□ 0.22
CHD1L-203ENST00000369259 HLCSP50747 726 aa16.4■□□□□ 0.22
CHD1L-203ENST00000369259 PRKAA2P54646 552 aa16.4■□□□□ 0.22
CHD1L-203ENST00000369259 MPP1Q00013 466 aa16.4■□□□□ 0.22
CHD1L-203ENST00000369259 MAPRE2Q15555 327 aa16.4■□□□□ 0.22
CHD1L-203ENST00000369259 DLG2Q15700 870 aa16.4■□□□□ 0.22
CHD1L-203ENST00000369259 REP15Q6BDI9 236 aa16.4■□□□□ 0.22
CHD1L-203ENST00000369259 CYP2U1Q7Z449 544 aa16.4■□□□□ 0.22
CHD1L-203ENST00000369259 ANKRD13AQ8IZ07 590 aa16.4■□□□□ 0.22
CHD1L-203ENST00000369259 FAM110BQ8TC76 370 aa16.4■□□□□ 0.22
CHD1L-203ENST00000369259 ZC3H15Q8WU90 426 aaKnown RBP16.4■□□□□ 0.22
CHD1L-203ENST00000369259 RAB2BQ8WUD1 216 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms