RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 TMIEQ8NEW7 156 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 OR14C36Q8NHC7 312 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 VOPP1Q96AW1 172 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 ZDHHC5Q9C0B5 715 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 MYO1AQ9UBC5 1043 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 FCF1Q9Y324 198 aaKnown RBP19.34■□□□□ 0.69
CKS1B-203ENST00000368439 WASF2Q9Y6W5 498 aa19.34■□□□□ 0.69
CKS1B-203ENST00000368439 UPK3BL1B0FP48 263 aa19.33■□□□□ 0.68
CKS1B-203ENST00000368439 UPK3BL2E5RIL1 263 aa19.33■□□□□ 0.68
CKS1B-203ENST00000368439 C1QTNF3-AMACRE9PGA6 284 aa19.33■□□□□ 0.68
CKS1B-203ENST00000368439 GIPC1O14908 333 aa19.33■□□□□ 0.68
CKS1B-203ENST00000368439 KDELR3O43731 214 aa19.33■□□□□ 0.68
CKS1B-203ENST00000368439 RAMP2O60895 175 aa19.33■□□□□ 0.68
CKS1B-203ENST00000368439 LRCH4O75427 683 aa19.33■□□□□ 0.68
CKS1B-203ENST00000368439 CSRP1P21291 193 aaKnown RBP19.33■□□□□ 0.68
CKS1B-203ENST00000368439 MIPP30301 263 aa19.33■□□□□ 0.68
CKS1B-203ENST00000368439 CSNK1EP49674 416 aaKnown RBP19.33■□□□□ 0.68
CKS1B-203ENST00000368439 AFF3P51826 1226 aaKnown RBP19.33■□□□□ 0.68
CKS1B-203ENST00000368439 ATXN3P54252 364 aaPredicted RBP19.33■□□□□ 0.68
CKS1B-203ENST00000368439 TAS2R38P59533 333 aa19.33■□□□□ 0.68
CKS1B-203ENST00000368439 POLD3Q15054 466 aaPredicted RBP19.33■□□□□ 0.68
CKS1B-203ENST00000368439 POM121L1PQ3SYA9 428 aa19.33■□□□□ 0.68
CKS1B-203ENST00000368439 PIP4P1Q86T03 277 aa19.33■□□□□ 0.68
CKS1B-203ENST00000368439 UMODL1-AS1Q8N2C9 162 aa19.33■□□□□ 0.68
CKS1B-203ENST00000368439 PCDH20Q8N6Y1 951 aaKnown RBP19.33■□□□□ 0.68
CKS1B-203ENST00000368439 ARRDC3Q96B67 414 aa19.33■□□□□ 0.68
CKS1B-203ENST00000368439 EPAS1Q99814 870 aa19.33■□□□□ 0.68
CKS1B-203ENST00000368439 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.33■□□□□ 0.68
CKS1B-203ENST00000368439 SNRNP25Q9BV90 132 aaKnown RBP19.33■□□□□ 0.68
CKS1B-203ENST00000368439 KLC2Q9H0B6 622 aa19.33■□□□□ 0.68
CKS1B-203ENST00000368439 THAP2Q9H0W7 228 aa19.33■□□□□ 0.68
CKS1B-203ENST00000368439 MRPL47Q9HD33 250 aaKnown RBP19.33■□□□□ 0.68
CKS1B-203ENST00000368439 PCSK1NQ9UHG2 260 aa19.33■□□□□ 0.68
CKS1B-203ENST00000368439 AP4E1Q9UPM8 1137 aa19.33■□□□□ 0.68
CKS1B-203ENST00000368439 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.33■□□□□ 0.68
CKS1B-203ENST00000368439 A0A1B0GVT2 93 aa19.32■□□□□ 0.68
CKS1B-203ENST00000368439 LATO43561 262 aa19.32■□□□□ 0.68
CKS1B-203ENST00000368439 OPHN1O60890 802 aa19.32■□□□□ 0.68
CKS1B-203ENST00000368439 TPM3P06753 285 aa19.32■□□□□ 0.68
CKS1B-203ENST00000368439 CD59P13987 128 aa19.32■□□□□ 0.68
CKS1B-203ENST00000368439 DESP17661 470 aa19.32■□□□□ 0.68
CKS1B-203ENST00000368439 HTR7P34969 479 aa19.32■□□□□ 0.68
CKS1B-203ENST00000368439 GRIA4P48058 902 aa19.32■□□□□ 0.68
CKS1B-203ENST00000368439 PPP2CBP62714 309 aa19.32■□□□□ 0.68
CKS1B-203ENST00000368439 PPP2CAP67775 309 aa19.32■□□□□ 0.68
CKS1B-203ENST00000368439 ERMARDQ5T6L9 678 aa19.32■□□□□ 0.68
CKS1B-203ENST00000368439 PIP5KL1Q5T9C9 394 aa19.32■□□□□ 0.68
CKS1B-203ENST00000368439 N4BP2L1Q5TBK1 243 aaPredicted RBP19.32■□□□□ 0.68
CKS1B-203ENST00000368439 PSAPL1Q6NUJ1 521 aa19.32■□□□□ 0.68
CKS1B-203ENST00000368439 ISG20Q96AZ6 181 aaKnown RBP19.32■□□□□ 0.68
CKS1B-203ENST00000368439 CCDC114Q96M63 670 aa19.32■□□□□ 0.68
CKS1B-203ENST00000368439 KCTD15Q96SI1 283 aaPredicted RBP19.32■□□□□ 0.68
CKS1B-203ENST00000368439 KDM4CQ9H3R0 1056 aa19.32■□□□□ 0.68
CKS1B-203ENST00000368439 IL21RQ9HBE5 538 aa19.32■□□□□ 0.68
CKS1B-203ENST00000368439 IL36AQ9UHA7 158 aa19.32■□□□□ 0.68
CKS1B-203ENST00000368439 FARP1Q9Y4F1 1045 aaPredicted RBP19.32■□□□□ 0.68
CKS1B-203ENST00000368439 EIF3CLB5ME19 914 aaKnown RBP19.31■□□□□ 0.68
CKS1B-203ENST00000368439 WNT9AO14904 365 aa19.31■□□□□ 0.68
CKS1B-203ENST00000368439 FGF10O15520 208 aaPredicted RBP19.31■□□□□ 0.68
CKS1B-203ENST00000368439 CBFA2T2O43439 604 aa19.31■□□□□ 0.68
CKS1B-203ENST00000368439 RNF8O76064 485 aa19.31■□□□□ 0.68
CKS1B-203ENST00000368439 PRNPP04156 253 aa19.31■□□□□ 0.68
CKS1B-203ENST00000368439 NOVA1P51513 510 aaKnown RBP19.31■□□□□ 0.68
CKS1B-203ENST00000368439 YBEYP58557 167 aaPredicted RBP19.31■□□□□ 0.68
CKS1B-203ENST00000368439 CARD16Q5EG05 197 aa19.31■□□□□ 0.68
CKS1B-203ENST00000368439 ARSIQ5FYB1 569 aa19.31■□□□□ 0.68
CKS1B-203ENST00000368439 KCNT1Q5JUK3 1230 aa19.31■□□□□ 0.68
CKS1B-203ENST00000368439 SPECC1LQ69YQ0 1117 aa19.31■□□□□ 0.68
CKS1B-203ENST00000368439 LAYNQ6UX15 382 aa19.31■□□□□ 0.68
CKS1B-203ENST00000368439 VPS36Q86VN1 386 aa19.31■□□□□ 0.68
CKS1B-203ENST00000368439 VSTM4Q8IW00 320 aa19.31■□□□□ 0.68
CKS1B-203ENST00000368439 PLPP6Q8IY26 295 aa19.31■□□□□ 0.68
CKS1B-203ENST00000368439 RNF214Q8ND24 703 aa19.31■□□□□ 0.68
CKS1B-203ENST00000368439 EIF3CQ99613 913 aaKnown RBP19.31■□□□□ 0.68
CKS1B-203ENST00000368439 DNAJC7Q99615 494 aa19.31■□□□□ 0.68
CKS1B-203ENST00000368439 DHX35Q9H5Z1 703 aaKnown RBP19.31■□□□□ 0.68
CKS1B-203ENST00000368439 LRRC19Q9H756 370 aa19.31■□□□□ 0.68
CKS1B-203ENST00000368439 CATSPERBQ9H7T0 1116 aa19.31■□□□□ 0.68
CKS1B-203ENST00000368439 CABIN1Q9Y6J0 2220 aa19.31■□□□□ 0.68
CKS1B-203ENST00000368439 TBC1D3DA0A087WVF3 549 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 TBC1D3IA0A087WXS9 549 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 TBC1D3EA0A087X179 549 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 TBC1D3KA0A087X1G2 549 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 TBC1D3FA6NER0 549 aaPredicted RBP19.3■□□□□ 0.68
CKS1B-203ENST00000368439 TBC1D3LB9A6J9 549 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 RASA4BC9J798 803 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 KPNA3O00505 521 aaPredicted RBP19.3■□□□□ 0.68
CKS1B-203ENST00000368439 RASA4O43374 803 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 LEFTY1O75610 366 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 WNT1P04628 370 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 CYP1A2P05177 515 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 TBC1D3HP0C7X1 549 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 CEACAM1P13688 526 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 TCF4P15884 667 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 IL1R2P27930 398 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 PCK1P35558 622 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 CCNHP51946 323 aaPredicted RBP19.3■□□□□ 0.68
CKS1B-203ENST00000368439 TPI1P60174 286 aa19.3■□□□□ 0.68
CKS1B-203ENST00000368439 RACK1P63244 317 aaKnown RBP19.3■□□□□ 0.68
CKS1B-203ENST00000368439 SLC14A1Q13336 389 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms