RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 GDAP1Q8TB36 358 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 MDM1Q8TC05 714 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 ARL8AQ96BM9 186 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 CYFIP2Q96F07 1278 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 SLC35A4Q96G79 324 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 FNBP1Q96RU3 617 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 TCF25Q9BQ70 676 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 CRACR2AQ9BSW2 395 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 TMEM120AQ9BXJ8 343 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 NUP62CLQ9H1M0 184 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 OR10A4Q9H209 315 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 PNNQ9H307 717 aaKnown RBP5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 CD93Q9NPY3 652 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 TBCCD1Q9NVR7 557 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 AATFQ9NY61 560 aaKnown RBP eCLIP5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 ZNF70Q9UC06 446 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 RIMKLBQ9ULI2 386 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 SLC4A4Q9Y6R1 1079 aa5.31□□□□□ -1.56
ECHDC1-204ENST00000368292 RPAP1Q9BWH6 1393 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 KRT87PA6NCN2 255 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 PRR23AA6NEV1 266 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 EPOPA6NHQ4 379 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 CYSRT1A8MQ03 144 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 NT5C1B-RDH14C9J2C7 533 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 PROB1E7EW31 1015 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 IRAK2O43187 625 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 MGEA5O60502 916 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 DIAPH2O60879 1101 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 NOL3O60936 208 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 ITGA10O75578 1167 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 CSPG5O95196 566 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 TRIM16O95361 564 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 TPM1P09493 284 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 PDHBP11177 359 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 CYP2B6P20813 491 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 PCSK1P29120 753 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 HOXA11P31270 313 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 CRHR1P34998 444 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 HOXD13P35453 343 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 CASRP41180 1078 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 TECP42680 631 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 PRIM2P49643 509 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 NR1H2P55055 460 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 NPEPPSP55786 919 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 PER3P56645 1201 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 RNASE9P60153 205 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 COG7P83436 770 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 BEX3Q00994 111 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 GALNT1Q10472 559 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 KIF5AQ12840 1032 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 BNIP1Q12981 228 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 MTM1Q13496 603 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 POLD3Q15054 466 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 PRKD1Q15139 912 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 CCL14Q16627 93 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 PGBD2Q6P3X8 592 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 IL27RAQ6UWB1 636 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 SLC39A5Q6ZMH5 540 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 ZNF783Q6ZMS7 281 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 CENPQQ7L2Z9 268 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 RSPH3Q86UC2 560 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 GGNQ86UU5 652 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 EFCAB13Q8IY85 973 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 SH2D3CQ8N5H7 860 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 FBXO18Q8NFZ0 1043 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 HSPH1Q92598 858 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 RUBCNQ92622 972 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 CASP10Q92851 521 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 RMDN1Q96DB5 314 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 FAM89AQ96GI7 184 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 APIPQ96GX9 242 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 ZNF512Q96ME7 567 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 PLEKHG4BQ96PX9 1271 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 WDR24Q96S15 920 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 GPR20Q99678 358 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 COA1Q9GZY4 146 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 RABEP2Q9H5N1 569 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 CRLF2Q9HC73 371 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 HOMER3Q9NSC5 361 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 PNPOQ9NVS9 261 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 ADPRHL2Q9NX46 363 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 MIS18AQ9NYP9 233 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 NCDNQ9UBB6 729 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 AJAP1Q9UKB5 411 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 CARD8Q9Y2G2 431 aa5.3□□□□□ -1.56
ECHDC1-204ENST00000368292 GAKO14976 1311 aa5.29□□□□□ -1.56
ECHDC1-204ENST00000368292 TCP10L2B9ZVM9 353 aa5.29□□□□□ -1.56
ECHDC1-204ENST00000368292 DNM1LO00429 736 aa5.29□□□□□ -1.56
ECHDC1-204ENST00000368292 EBAG9O00559 213 aa5.29□□□□□ -1.56
ECHDC1-204ENST00000368292 PHGDHO43175 533 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-204ENST00000368292 PRPSAP2O60256 369 aa5.29□□□□□ -1.56
ECHDC1-204ENST00000368292 SEC22BO75396 215 aa5.29□□□□□ -1.56
ECHDC1-204ENST00000368292 ERLIN1O75477 346 aa5.29□□□□□ -1.56
ECHDC1-204ENST00000368292 SLITRK3O94933 977 aa5.29□□□□□ -1.56
ECHDC1-204ENST00000368292 SLU7O95391 586 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-204ENST00000368292 SERPINC1P01008 464 aa5.29□□□□□ -1.56
ECHDC1-204ENST00000368292 GASTP01350 101 aa5.29□□□□□ -1.56
ECHDC1-204ENST00000368292 ITGB1P05556 798 aa5.29□□□□□ -1.56
ECHDC1-204ENST00000368292 ATP5BP06576 529 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms