RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 CCDC140Q96MF4 163 aa6.72□□□□□ -1.33
ECHDC1-202ENST00000368289 TTC25Q96NG3 672 aa6.72□□□□□ -1.33
ECHDC1-202ENST00000368289 ZNF558Q96NG5 402 aa6.72□□□□□ -1.33
ECHDC1-202ENST00000368289 PDCD2LQ9BRP1 358 aa6.72□□□□□ -1.33
ECHDC1-202ENST00000368289 NUP85Q9BW27 656 aa6.72□□□□□ -1.33
ECHDC1-202ENST00000368289 PRORYQ9H606 182 aa6.72□□□□□ -1.33
ECHDC1-202ENST00000368289 PPANQ9NQ55 473 aaKnown RBP6.72□□□□□ -1.33
ECHDC1-202ENST00000368289 PXMP2Q9NR77 195 aa6.72□□□□□ -1.33
ECHDC1-202ENST00000368289 INTS9Q9NV88 658 aaKnown RBP6.72□□□□□ -1.33
ECHDC1-202ENST00000368289 SNTG2Q9NY99 539 aa6.72□□□□□ -1.33
ECHDC1-202ENST00000368289 SENP1Q9P0U3 644 aa6.72□□□□□ -1.33
ECHDC1-202ENST00000368289 SAMD15Q9P1V8 674 aa6.72□□□□□ -1.33
ECHDC1-202ENST00000368289 FETUBQ9UGM5 382 aa6.72□□□□□ -1.33
ECHDC1-202ENST00000368289 AJAP1Q9UKB5 411 aaPredicted RBP6.72□□□□□ -1.33
ECHDC1-202ENST00000368289 CNTN6Q9UQ52 1028 aa6.72□□□□□ -1.33
ECHDC1-202ENST00000368289 ATP8A1Q9Y2Q0 1164 aa6.72□□□□□ -1.33
ECHDC1-202ENST00000368289 RIPK2O43353 540 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 EXTL3O43909 919 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 ATP5HO75947 161 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 KCNH1O95259 989 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 PAPSS2O95340 614 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 LSM8O95777 96 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 CYP1A1P04798 512 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 ITGAVP06756 1048 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 CD3EP07766 207 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 GSTM1P09488 218 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 CHRNB1P11230 501 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 TSHRP16473 764 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 CHRNB2P17787 502 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 HPDP32754 393 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 CNR2P34972 360 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 PTPN7P35236 360 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 GDNFP39905 211 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 NPTX2P47972 431 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 CXCL12P48061 93 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 GCLMP48507 274 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 PEX3P56589 373 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 YWHAEP62258 255 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 NTHL1P78549 312 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 MRPS9P82933 396 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 KRT17Q04695 432 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 CHRNEQ04844 493 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 STRN3Q13033 797 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 XRCC4Q13426 336 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 RIPK1Q13546 671 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 MESDQ14696 234 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 PPP1R7Q15435 360 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 XKR3Q5GH77 459 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 SPDYAQ5MJ70 313 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 C1orf220Q5T0J3 134 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 ARHGEF16Q5VV41 709 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 MIS18BP1Q6P0N0 1132 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 ZDHHC24Q6UX98 284 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 CRELD2Q6UXH1 353 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 PPP1R21Q6ZMI0 780 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 ARHGEF18Q6ZSZ5 1173 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 GET4Q7L5D6 327 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 PCGF5Q86SE9 256 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 NOP9Q86U38 636 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 DDX42Q86XP3 938 aaKnown RBP eCLIP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 PHF13Q86YI8 300 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 RHOT1Q8IXI2 618 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 KATNAL2Q8IYT4 538 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 RCOR2Q8IZ40 523 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 OXR1Q8N573 874 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 SH2D3CQ8N5H7 860 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 EXD1Q8NHP7 514 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 CFAP61Q8NHU2 1237 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 FBXO25Q8TCJ0 367 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 ALG3Q92685 438 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 ZNF653Q96CK0 615 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 ARHGEF26Q96DR7 871 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 RBM41Q96IZ5 413 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 FCRL2Q96LA5 508 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 MRGPRX3Q96LB0 322 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 ZNF317Q96PQ6 595 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 RMDN3Q96TC7 470 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 NELL2Q99435 816 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 ADAM2Q99965 735 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 KXD1Q9BQD3 176 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 CBWD1Q9BRT8 395 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 CDADC1Q9BWV3 514 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 SLC12A9Q9BXP2 914 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 NEUROG2Q9H2A3 272 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 DPH5Q9H2P9 285 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 CENPHQ9H3R5 247 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 LMAN1LQ9HAT1 526 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 ATP6V0A4Q9HBG4 840 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 MAN1C1Q9NR34 630 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 GRHL1Q9NZI5 618 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 ARHGAP28Q9P2N2 729 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 WRAP73Q9P2S5 460 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 CNOT8Q9UFF9 292 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 IP6K2Q9UHH9 426 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 LGALS13Q9UHV8 139 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 NDRG2Q9UN36 371 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 DRG1Q9Y295 367 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 CAPN7Q9Y6W3 813 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 SPG11Q96JI7 2443 aa6.71□□□□□ -1.34
ECHDC1-202ENST00000368289 ABCA7Q8IZY2 2146 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms