RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 TJAP1Q5JTD0 557 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 ZNF618Q5T7W0 954 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 FUT10Q6P4F1 479 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 FAM124BQ9H5Z6 455 aaPredicted RBP11.75□□□□□ -0.53
SYNE1-204ENST00000367248 RERGLQ9H628 205 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 SH3BP4Q9P0V3 963 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 GABRQQ9UN88 632 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 SHPRHQ149N8 1683 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 KRT87PA6NCN2 255 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 H3BMM5 538 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 FSBPO95073 299 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 EEF1DP29692 281 aaKnown RBP11.75□□□□□ -0.53
SYNE1-204ENST00000367248 EML3Q32P44 896 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 SLC25A52Q3SY17 297 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 ARMCX6Q7L4S7 300 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 C7orf43Q8WVR3 580 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 EME1Q96AY2 570 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 PIF1Q9H611 641 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 RMND5AQ9H871 391 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 EFCAB1Q9HAE3 211 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.75□□□□□ -0.53
SYNE1-204ENST00000367248 RNF225M0QZC1 329 aaPredicted RBP11.75□□□□□ -0.53
SYNE1-204ENST00000367248 GUCA1AP43080 201 aaPredicted RBP11.75□□□□□ -0.53
SYNE1-204ENST00000367248 TRIP10Q15642 601 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 C11orf84Q9BUA3 381 aaPredicted RBP11.75□□□□□ -0.53
SYNE1-204ENST00000367248 PCDH18Q9HCL0 1135 aa11.75□□□□□ -0.53
SYNE1-204ENST00000367248 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.75□□□□□ -0.53
SYNE1-204ENST00000367248 ABCG1P45844 678 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 VEGFBP49765 207 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 CDK18Q07002 472 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 TGM3Q08188 693 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 EIF1ADQ8N9N8 165 aaKnown RBP11.74□□□□□ -0.53
SYNE1-204ENST00000367248 DMAC2Q9NW81 257 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 DUS2Q9NX74 493 aaKnown RBP11.74□□□□□ -0.53
SYNE1-204ENST00000367248 VPS51Q9UID3 782 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 A0A1W2PQH9 124 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 CATP04040 527 aaKnown RBP11.74□□□□□ -0.53
SYNE1-204ENST00000367248 ETS1P14921 441 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 SLC26A9Q7LBE3 791 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 ALG3Q92685 438 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 RPS6KB2Q9UBS0 482 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 GMEB2Q9UKD1 530 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 Q9Y3F1 56 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 A0A0U1RQJ8 604 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 NR6A1Q15406 480 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 SLC35G1Q2M3R5 365 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 AENQ8WTP8 325 aaKnown RBP11.74□□□□□ -0.53
SYNE1-204ENST00000367248 ACBD6Q9BR61 282 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 GTPBP2Q9BX10 602 aaKnown RBP11.74□□□□□ -0.53
SYNE1-204ENST00000367248 ATP13A3Q9H7F0 1226 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.74□□□□□ -0.53
SYNE1-204ENST00000367248 PCYOX1Q9UHG3 505 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 SYN3O14994 580 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 LILRA4P59901 499 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 CYP4F8P98187 520 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 ZNF662Q6ZS27 426 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 DEFB119Q8N690 84 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 TCP10LQ8TDR4 215 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 ELMO1Q92556 727 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 KLK6Q92876 244 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 HNRNPABQ99729 332 aaKnown RBP11.74□□□□□ -0.53
SYNE1-204ENST00000367248 KLC4Q9NSK0 619 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 STXBP5LQ9Y2K9 1186 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 KCPQ6ZWJ8 1503 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 UBDO15205 165 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 C8AP07357 584 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 ENO2P09104 434 aaPredicted RBP11.74□□□□□ -0.53
SYNE1-204ENST00000367248 ANXA11P50995 505 aaKnown RBP11.74□□□□□ -0.53
SYNE1-204ENST00000367248 ZNF844Q08AG5 666 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 SLC10A6Q3KNW5 377 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 CCDC153Q494R4 210 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 C16orf46Q6P387 395 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 RASAL3Q86YV0 1011 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 H2AFY2Q9P0M6 372 aaPredicted RBP11.74□□□□□ -0.53
SYNE1-204ENST00000367248 GMIPQ9P107 970 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 MKL2Q9ULH7 1088 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 RFWD3Q6PCD5 774 aa11.74□□□□□ -0.53
SYNE1-204ENST00000367248 C2orf73Q8N5S3 287 aaPredicted RBP11.74□□□□□ -0.53
SYNE1-204ENST00000367248 OXCT2Q9BYC2 517 aaPredicted RBP11.74□□□□□ -0.53
SYNE1-204ENST00000367248 BTN3A1O00481 513 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 DHX15O43143 795 aaKnown RBP11.73□□□□□ -0.53
SYNE1-204ENST00000367248 CLDN11O75508 207 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 GJA1P17302 382 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 CCNG1P51959 295 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 DGKEP52429 567 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 MMRN1Q13201 1228 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 KRT78Q8N1N4 520 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 ARL14EPQ8N8R7 260 aaPredicted RBP11.73□□□□□ -0.53
SYNE1-204ENST00000367248 DQX1Q8TE96 717 aaKnown RBP11.73□□□□□ -0.53
SYNE1-204ENST00000367248 ASB8Q9H765 288 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 AGO1Q9UL18 857 aaKnown RBP11.73□□□□□ -0.53
SYNE1-204ENST00000367248 SNED1Q8TER0 1413 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 ZNF536O15090 1300 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 PHGDHO43175 533 aaKnown RBP11.73□□□□□ -0.53
SYNE1-204ENST00000367248 PAGE1O75459 146 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 HSPA1AP0DMV8 641 aaKnown RBP11.73□□□□□ -0.53
SYNE1-204ENST00000367248 HSPA1BP0DMV9 641 aaKnown RBP11.73□□□□□ -0.53
SYNE1-204ENST00000367248 ERVK-21P61565 698 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 CRY1Q16526 586 aa11.73□□□□□ -0.53
SYNE1-204ENST00000367248 ATP6AP1LQ52LC2 224 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms