RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 DDX18Q9NVP1 670 aaKnown RBP14.97□□□□□ -0.01
PRKN-204ENST00000366896 RHBDL2Q9NX52 303 aa14.97□□□□□ -0.01
PRKN-204ENST00000366896 SYBUQ9NX95 663 aa14.97□□□□□ -0.01
PRKN-204ENST00000366896 COPG2Q9UBF2 871 aa14.97□□□□□ -0.01
PRKN-204ENST00000366896 RALGAPA2Q2PPJ7 1873 aa14.97□□□□□ -0.01
PRKN-204ENST00000366896 MX2P20592 715 aa14.97□□□□□ -0.01
PRKN-204ENST00000366896 LMO2P25791 158 aa14.97□□□□□ -0.01
PRKN-204ENST00000366896 MATKP42679 507 aa14.97□□□□□ -0.01
PRKN-204ENST00000366896 PITX1P78337 314 aaPredicted RBP14.97□□□□□ -0.01
PRKN-204ENST00000366896 CYLC2Q14093 348 aaPredicted RBP14.97□□□□□ -0.01
PRKN-204ENST00000366896 PDK1Q15118 436 aa14.97□□□□□ -0.01
PRKN-204ENST00000366896 TRIM71Q2Q1W2 868 aaKnown RBP14.97□□□□□ -0.01
PRKN-204ENST00000366896 ACBD5Q5T8D3 534 aaPredicted RBP14.97□□□□□ -0.01
PRKN-204ENST00000366896 EFCAB3Q8N7B9 438 aa14.97□□□□□ -0.01
PRKN-204ENST00000366896 STON2Q8WXE9 905 aa14.97□□□□□ -0.01
PRKN-204ENST00000366896 KCNK16Q96T55 309 aa14.97□□□□□ -0.01
PRKN-204ENST00000366896 EIF2AQ9BY44 585 aaKnown RBP14.97□□□□□ -0.01
PRKN-204ENST00000366896 SENP6Q9GZR1 1112 aaPredicted RBP14.97□□□□□ -0.01
PRKN-204ENST00000366896 SEPT10Q9P0V9 454 aa14.97□□□□□ -0.01
PRKN-204ENST00000366896 NOD1Q9Y239 953 aa14.97□□□□□ -0.01
PRKN-204ENST00000366896 MYO18AQ92614 2054 aaKnown RBP14.96□□□□□ -0.01
PRKN-204ENST00000366896 DNAH12Q6ZR08 3092 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 hCG_2014768A0A024R1R8 64 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 CCDC160A6NGH7 325 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 TNFAIP8O95379 198 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 RPLP2P05387 115 aaKnown RBP14.96□□□□□ -0.01
PRKN-204ENST00000366896 ERVK-10P10266 1014 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 DARSP14868 501 aaKnown RBP14.96□□□□□ -0.01
PRKN-204ENST00000366896 PSMB4P28070 264 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 CRYBB1P53674 252 aaPredicted RBP14.96□□□□□ -0.01
PRKN-204ENST00000366896 SULT2A1Q06520 285 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 USP41Q3LFD5 358 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 SLC25A52Q3SY17 297 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 ZNF618Q5T7W0 954 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 VWA5B1Q5TIE3 1220 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 METTL21CQ5VZV1 264 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 TP53INP2Q8IXH6 220 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 TMEM40Q8WWA1 233 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 TSPAN18Q96SJ8 248 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 GRIP2Q9C0E4 1043 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 SUDS3Q9H7L9 328 aaPredicted RBP14.96□□□□□ -0.01
PRKN-204ENST00000366896 ZNF358Q9NW07 568 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 PCDHGB4Q9UN71 923 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 PCDHGB5Q9Y5G0 923 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 RAD54BQ9Y620 910 aa14.96□□□□□ -0.01
PRKN-204ENST00000366896 FBXO21O94952 628 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 CRTAMO95727 393 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 POLBP06746 335 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 EMP3P54852 163 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 ABCE1P61221 599 aaKnown RBP14.96□□□□□ -0.02
PRKN-204ENST00000366896 MYBPC1Q00872 1141 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 MGAT3Q09327 533 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 APOFQ13790 326 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 SNX17Q15036 470 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 PAFAH1B3Q15102 231 aaKnown RBP14.96□□□□□ -0.02
PRKN-204ENST00000366896 PCBP1Q15365 356 aaKnown RBP eCLIP14.96□□□□□ -0.02
PRKN-204ENST00000366896 CNGA3Q16281 694 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 BORAQ6PGQ7 559 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 LIMS2Q7Z4I7 341 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 DIS3LQ8TF46 1054 aaKnown RBP14.96□□□□□ -0.02
PRKN-204ENST00000366896 KBTBD7Q8WVZ9 684 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 GAB3Q8WWW8 586 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 NT5C3BQ969T7 300 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 P2RY11Q96G91 374 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 TMEM216Q9P0N5 145 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 ARHGAP26Q9UNA1 814 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 PCDHB12Q9Y5F1 795 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 TRPV2Q9Y5S1 764 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 CDY2AQ9Y6F7 541 aa14.96□□□□□ -0.02
PRKN-204ENST00000366896 SYNJ2BP-COX16A0A087WUM0 186 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 ARHGAP10A1A4S6 786 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 COL6A1P12109 1028 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 THPOP40225 353 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 MLH1P40692 756 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 CREB5Q02930 508 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 PEX6Q13608 980 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 OTUD1Q5VV17 481 aaPredicted RBP14.95□□□□□ -0.02
PRKN-204ENST00000366896 ALKAL1Q6UXT8 129 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 CMC1Q7Z7K0 106 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 TMEM126BQ8IUX1 230 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 FAM126BQ8IXS8 530 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 GDAP2Q9NXN4 497 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 COX16Q9P0S2 106 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 AP4B1Q9Y6B7 739 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 CDY1Q9Y6F8 540 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 ZNF638Q14966 1978 aaKnown RBP14.95□□□□□ -0.02
PRKN-204ENST00000366896 LOC100653049A0A140TA62 436 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 COQ9O75208 318 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 H2AFYO75367 372 aaKnown RBP14.95□□□□□ -0.02
PRKN-204ENST00000366896 KRT34O76011 436 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 CHRNA1P02708 482 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 CTSHP09668 335 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 RALBP11234 206 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 COX4I1P13073 169 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 HOXA11P31270 313 aaPredicted RBP14.95□□□□□ -0.02
PRKN-204ENST00000366896 NUMBP49757 651 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 TICAM1Q8IUC6 712 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 PHTF2Q8N3S3 785 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 SLC2A14Q8TDB8 520 aa14.95□□□□□ -0.02
PRKN-204ENST00000366896 PPP1R14BQ96C90 147 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms