RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 C6orf222P0C671 652 aaPredicted RBP11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 UNGP13051 313 aaPredicted RBP11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 ATP6V0D1P61421 351 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 TMEM62Q0P6H9 643 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 TMEM26Q6ZUK4 368 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 RFWD2Q8NHY2 731 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 ADAM30Q9UKF2 790 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 AREL1O15033 823 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 PDPRQ8NCN5 879 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 RAD21L1Q9H4I0 556 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 CLIC5Q9NZA1 410 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 PRR5-ARHGAP8B1AHC4 643 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 ARHGAP8P85298 464 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 SLC5A9Q2M3M2 681 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 RIOX2Q8IUF8 465 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 CERS5Q8N5B7 392 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 ABI2Q9NYB9 513 aaPredicted RBP11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 SAE1Q9UBE0 346 aaPredicted RBP11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 HOXA2O43364 376 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 LRCH4O75427 683 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 LYNP07948 512 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 PKNOX1P55347 436 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 CDH18Q13634 790 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 NFICP08651 508 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 CES1P23141 567 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 JAK1P23458 1154 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 GRIK5Q16478 980 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 STXBP5Q5T5C0 1151 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 CYP4Z1Q86W10 505 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 CPB2Q96IY4 423 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 RNF145Q96MT1 663 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 EXOSC4Q9NPD3 245 aaKnown RBP11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 CNGB3Q9NQW8 809 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 ALS2Q96Q42 1657 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 FAM187BQ17R55 369 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 SLC25A52Q3SY17 297 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 PACS1Q6VY07 963 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 CORO2BQ9UQ03 480 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 PTCH2Q9Y6C5 1203 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 HERC3Q15034 1050 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 SGO1Q5FBB7 561 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 C10orf82Q8WW14 230 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 BBS2Q9BXC9 721 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 GIMAP4Q9NUV9 329 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 RPS6KA6Q9UK32 745 aa11.95□□□□□ -0.5
CDC42BPA-202ENST00000366764 SYNCRIPO60506 623 aaKnown RBP11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 PRKG2Q13237 762 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 TXNDC11Q6PKC3 985 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 ZFPM1Q8IX07 1006 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 PHF21BQ96EK2 531 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 PCDH18Q9HCL0 1135 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 CATSPERZQ9NTU4 200 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 TCRBV7S2A1N4TA0A589 114 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 PEX1O43933 1283 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 ALOX5P09917 674 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 OR52K1Q8NGK4 314 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 HPS4Q9NQG7 708 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 SHROOM3Q8TF72 1996 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 NEDD8Q15843 81 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 OR7A2PQ8NGA2 310 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 DOT1LQ8TEK3 1739 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 GRIA3P42263 894 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 ITGA1P56199 1179 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 C15orf59Q2T9L4 293 aaPredicted RBP11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 STK32CQ86UX6 486 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 AMER2Q8N7J2 671 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 PLD5Q8N7P1 536 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 ATG16L2Q8NAA4 619 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 SPATA16Q9BXB7 569 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 NIFKQ9BYG3 293 aaKnown RBP11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 IL2P60568 153 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 TSNQ15631 228 aaKnown RBP11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 SLC4A5Q9BY07 1137 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 ACTR8Q9H981 624 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 ZNF682O95780 498 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 VTNP04004 478 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 TUBP50607 506 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 HPCAP84074 193 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 CACNB2Q08289 660 aaPredicted RBP11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 CNTN1Q12860 1018 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 LPIN1Q14693 890 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 CELF3Q5SZQ8 465 aaKnown RBP11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 TRAF7Q6Q0C0 670 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 RBM44Q6ZP01 1051 aaKnown RBP11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 TLR8Q9NR97 1041 aaKnown RBP11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 PCDHB12Q9Y5F1 795 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 PLCH1Q4KWH8 1693 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 SMNDC1O75940 238 aaKnown RBP eCLIP11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 TMEM126BQ8IUX1 230 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 ZSCAN18Q8TBC5 510 aaPredicted RBP11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 PLK2Q9NYY3 685 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 SNED1Q8TER0 1413 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 DOCK2Q92608 1830 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 PTPN9P43378 593 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 PSEN1P49768 467 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 MAP3K7CLP57077 242 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 OVOS1Q6IE37 1185 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 CYP2R1Q6VVX0 501 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 LUZP2Q86TE4 346 aa11.94□□□□□ -0.5
CDC42BPA-202ENST00000366764 DPY30Q9C005 99 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms