RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 MYBPC2Q14324 1141 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 SF3B4Q15427 424 aaKnown RBP eCLIP2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 TBRG1Q3YBR2 411 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 SERPINA11Q86U17 422 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 WDR5BQ86VZ2 330 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 DCUN1D3Q8IWE4 304 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 ZDHHC23Q8IYP9 409 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 LMNTD1Q8N9Z9 388 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 POC1AQ8NBT0 407 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 SPATA20Q8TB22 786 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 HDAC7Q8WUI4 952 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 KCNJ9Q92806 393 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 KIAA1191Q96A73 305 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 TMEM18Q96B42 140 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 NPAS1Q99742 590 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 KLHL42Q9P2K6 505 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 OSGIN2Q9Y236 505 aa2.52□□□□□ -2.01
RNU4-42P-201ENST00000364738 IGLV5-37A0A075B6J1 123 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 NPIPB13A6NJU9 1138 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 NPIPB5A8MRT5 1133 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 NPIPB4C9JG80 1138 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 CLGNO14967 610 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 LMX1BO60663 402 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 HMGB1P09429 215 aaKnown RBP2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 FCGR2AP12318 317 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 CKMT1AP12532 417 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 TRIM27P14373 513 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 CXCR3P49682 368 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 ILF3Q12906 894 aaKnown RBP eCLIP2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 MYBPHQ13203 477 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 RBM39Q14498 530 aaKnown RBP2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 CEP85LQ5SZL2 805 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 STPG1Q5TH74 334 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 TYW3Q6IPR3 259 aaKnown RBP2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 MTFR2Q6P444 385 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 ZNF449Q6P9G9 518 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 SCN4BQ8IWT1 228 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 NAGSQ8N159 534 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 SLC2A12Q8TD20 617 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 C2CD4CQ8TF44 421 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 CADM1Q9BY67 442 aaKnown RBP2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 GAREM1Q9H706 876 aa2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 SEPSECSQ9HD40 501 aaKnown RBP2.51□□□□□ -2.01
RNU4-42P-201ENST00000364738 NOTCH3Q9UM47 2321 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 DYTNA2CJ06 578 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 EFCAB8A8MWE9 144 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 SYN3O14994 580 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 CCNT1O60563 726 aaKnown RBP2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 AFPP02771 609 aaKnown RBP2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 CENPBP07199 599 aaPredicted RBP2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 AMD1P17707 334 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 PEX5P50542 639 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 TRIM60Q495X7 471 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 ATPAF1Q5TC12 328 aaPredicted RBP2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 TMEM268Q5VZI3 342 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 ZNF771Q7L3S4 317 aaPredicted RBP2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 PATL1Q86TB9 770 aaKnown RBP2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 TRIM74Q86UV6 250 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 TRIM73Q86UV7 250 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 EXOC3L1Q86VI1 746 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 TEX45Q8NA69 505 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 PJA1Q8NG27 643 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 PARD3BQ8TEW8 1205 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 RSC1A1Q92681 617 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 BICD1Q96G01 975 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 CCDC138Q96M89 665 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 PIGSQ96S52 555 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 BRD8Q9H0E9 1235 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 ACAD9Q9H845 621 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 SLC22A11Q9NSA0 550 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 UPB1Q9UBR1 384 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 SLC45A1Q9Y2W3 748 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 MST1RQ04912 1400 aa2.5□□□□□ -2.01
RNU4-42P-201ENST00000364738 A0A0U1RQJ8 604 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 A0A1B0GVM2 712 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 MAGEA13PA6NCF6 341 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 PRAC2D3DTV9 90 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 KIF1CO43896 1103 aaKnown RBP2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 TNFRSF6BO95407 300 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 CH25HO95992 272 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 SERPINB2P05120 415 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 LYL1P12980 280 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 ABCB4P21439 1286 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 RPL3P39023 403 aaKnown RBP2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 SKIV2L2P42285 1042 aaKnown RBP2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 DPP6P42658 865 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 KRTAP10-12P60413 245 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 HDAC1Q13547 482 aaPredicted RBP2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 PLEKHO1Q53GL0 409 aaPredicted RBP2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 XKR9Q5GH70 373 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 TBC1D9BQ66K14 1250 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 PMS2CLQ68D20 193 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 NCAPH2Q6IBW4 605 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 ADAM5Q6NVV9 412 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 NFRKBQ6P4R8 1299 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 RHBDF2Q6PJF5 856 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 C9orf139Q6ZV77 190 aa2.49□□□□□ -2.01
RNU4-42P-201ENST00000364738 RAB11FIP2Q7L804 512 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms